| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdh10a | 0.235 | col11a1a | -0.111 |
| dlx4b | 0.149 | tnn | -0.110 |
| dlx4a | 0.147 | cnmd | -0.100 |
| sostdc1a | 0.138 | matn4 | -0.095 |
| nr5a2 | 0.132 | bhmt | -0.095 |
| dlx5a | 0.127 | col9a3 | -0.094 |
| dlx3b | 0.124 | col9a2 | -0.092 |
| si:dkey-1c11.1 | 0.108 | col2a1a | -0.091 |
| ednrab | 0.108 | col11a2 | -0.090 |
| lmx1a | 0.107 | col9a1a | -0.088 |
| nr2f1b | 0.106 | epyc | -0.088 |
| meis1b | 0.106 | fmoda | -0.086 |
| nr2f1a | 0.104 | ca6 | -0.084 |
| si:dkey-261h17.1 | 0.104 | otos | -0.084 |
| vasna | 0.100 | col2a1b | -0.080 |
| dlx6a | 0.099 | emilin1a | -0.079 |
| krt94 | 0.093 | cthrc1a | -0.077 |
| gsc | 0.093 | VIT | -0.075 |
| dlx2a | 0.092 | snorc | -0.074 |
| foxd3 | 0.092 | thbs1b | -0.074 |
| mmel1 | 0.090 | mia | -0.074 |
| rspo3 | 0.086 | vwde | -0.073 |
| hepacama | 0.085 | ucmab | -0.073 |
| atoh1a | 0.085 | matn1 | -0.072 |
| foxj1a | 0.085 | cdo1 | -0.071 |
| isl2a | 0.084 | wisp3 | -0.071 |
| hnrnpaba | 0.084 | sparc | -0.071 |
| hsp90ab1 | 0.083 | fxyd1 | -0.071 |
| jun | 0.083 | acana | -0.070 |
| hnrnpa0a | 0.083 | si:dkey-6n6.1 | -0.069 |
| mex3b | 0.082 | col11a1b | -0.068 |
| si:ch211-39i22.1 | 0.082 | si:ch73-86n18.1 | -0.067 |
| nrp1a | 0.081 | apof | -0.066 |
| chd4a | 0.081 | aldob | -0.066 |
| h3f3d | 0.081 | tuba8l2 | -0.065 |