| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.333 | eef1a1l1 | -0.315 |
| spink2.1 | 0.324 | si:ch211-222l21.1 | -0.284 |
| ccna1 | 0.317 | hmga1a | -0.270 |
| acp5a | 0.317 | si:ch73-1a9.3 | -0.265 |
| h1m | 0.307 | si:ch211-152c2.3 | -0.261 |
| zgc:173742 | 0.304 | dynll1 | -0.258 |
| cldnd | 0.295 | hspb1 | -0.254 |
| h2af1al | 0.294 | rplp1 | -0.252 |
| lamp2 | 0.284 | hmgb2a | -0.251 |
| rbm7 | 0.284 | hnrnpa0b | -0.244 |
| gtf2a1 | 0.280 | ybx1 | -0.243 |
| zgc:113424 | 0.280 | rps6 | -0.240 |
| blf | 0.278 | ptmab | -0.230 |
| mkrn4 | 0.273 | npm1a | -0.229 |
| rcor1 | 0.270 | anp32e | -0.227 |
| ska2 | 0.265 | rpl7a | -0.220 |
| gdf3 | 0.264 | hmgn6 | -0.219 |
| npc2 | 0.253 | si:dkey-151g10.6 | -0.218 |
| dnajc1 | 0.252 | rps7 | -0.216 |
| zgc:100951 | 0.249 | rps15a | -0.214 |
| zgc:77118 | 0.245 | rplp0 | -0.212 |
| mid1ip1l | 0.245 | rpl26 | -0.209 |
| mknk2a | 0.243 | rps19 | -0.207 |
| wee2 | 0.242 | rpsa | -0.207 |
| cth1 | 0.241 | rps12 | -0.206 |
| pfn2 | 0.239 | rpl27 | -0.205 |
| ccnb2 | 0.239 | aldob | -0.205 |
| tent5c | 0.239 | rps4x | -0.203 |
| pabpn1l | 0.237 | polr3gla | -0.203 |
| dctpp1 | 0.236 | add3b | -0.203 |
| ttf1 | 0.234 | stm | -0.199 |
| si:dkey-68o6.5 | 0.233 | rpl11 | -0.199 |
| tent4b | 0.233 | apoeb | -0.197 |
| slc16a3 | 0.233 | marcksl1b | -0.193 |
| gpatch4 | 0.232 | nop2 | -0.192 |