| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.318 | NC-002333.4 | -0.289 |
| zgc:56676 | 0.304 | hmgb2a | -0.208 |
| lamp2 | 0.290 | si:ch211-222l21.1 | -0.189 |
| glulb | 0.286 | akap12b | -0.176 |
| npc2 | 0.272 | si:ch73-1a9.3 | -0.175 |
| cldnd | 0.269 | ncl | -0.174 |
| rbm7 | 0.269 | zgc:110425 | -0.174 |
| zgc:173742 | 0.267 | nucks1a | -0.170 |
| spink2.1 | 0.266 | eef1a1l1 | -0.168 |
| acp5a | 0.264 | ptmab | -0.166 |
| gtf2a1 | 0.263 | si:ch211-113a14.18 | -0.161 |
| mkrn4 | 0.260 | hmga1a | -0.160 |
| ccna1 | 0.258 | rpl11 | -0.160 |
| ctsla | 0.258 | si:dkey-108k21.10 | -0.159 |
| pttg1 | 0.254 | npm1a | -0.158 |
| blf | 0.252 | mt-co1 | -0.157 |
| dctpp1 | 0.245 | hmgn2 | -0.157 |
| h1m | 0.244 | sox2 | -0.151 |
| cdca7a | 0.244 | rplp1 | -0.151 |
| bzw1b | 0.243 | si:ch211-137a8.4 | -0.150 |
| gpatch4 | 0.237 | serpinh1b | -0.150 |
| vgll4l | 0.236 | hmgn6 | -0.147 |
| si:dkey-42i9.4 | 0.233 | crabp2b | -0.145 |
| cited4b | 0.231 | rps15a | -0.139 |
| si:dkey-68o6.5 | 0.231 | nop2 | -0.138 |
| zgc:100951 | 0.230 | hspe1 | -0.137 |
| abhd10b | 0.228 | si:dkey-261m9.12 | -0.137 |
| stk35l | 0.228 | add3b | -0.136 |
| ctsba | 0.227 | hsp90ab1 | -0.134 |
| gdf3 | 0.227 | apoc1 | -0.132 |
| inka1a | 0.226 | alcamb | -0.130 |
| ccnb2 | 0.226 | anp32e | -0.129 |
| h2af1al | 0.224 | dynll1 | -0.124 |
| cnot8 | 0.223 | hsp90aa1.2 | -0.122 |
| dnajc1 | 0.221 | sept12 | -0.122 |