Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| soga3 | 0.827 | rpl19 | -0.066 |
| TMEM196 (1 of many) | 0.610 | rpl10 | -0.054 |
| pax2b | 0.404 | rpl10a | -0.050 |
| LOC108182866 | 0.402 | rpsa | -0.049 |
| si:ch211-165g14.1 | 0.364 | rpl24 | -0.049 |
| cmn | 0.358 | mt-co2 | -0.047 |
| faxcb | 0.322 | rps5 | -0.046 |
| atp9b | 0.276 | rpl32 | -0.046 |
| pfkfb3 | 0.275 | actb2 | -0.045 |
| si:dkey-56m15.3 | 0.270 | rpl14 | -0.045 |
| gria2a | 0.256 | rpl18 | -0.044 |
| l3hypdh | 0.254 | hspa8 | -0.043 |
| trafd1 | 0.237 | rps4x | -0.043 |
| tnfaip2a | 0.233 | rpl9 | -0.041 |
| suz12a | 0.223 | rack1 | -0.040 |
| bicc1a | 0.222 | tpt1 | -0.039 |
| dbf4 | 0.221 | rpl22 | -0.039 |
| usp2a | 0.219 | rplp2 | -0.037 |
| METTL18 | 0.216 | rpl27a | -0.036 |
| RF00319 | 0.213 | ppiab | -0.035 |
| usp32 | 0.200 | col1a1a | -0.033 |
| zgc:158517 | 0.200 | mt-cyb | -0.033 |
| dnajb14 | 0.182 | uba52 | -0.033 |
| cmpk2 | 0.181 | sparc | -0.032 |
| zgc:153115 | 0.177 | eef1g | -0.032 |
| batf3 | 0.175 | btf3 | -0.028 |
| si:ch73-130a3.4 | 0.172 | rpl5a | -0.028 |
| nol6 | 0.171 | eef2b | -0.028 |
| her4.4 | 0.169 | h3f3d | -0.027 |
| pcdh2ab7 | 0.168 | eef1a1l1 | -0.027 |
| slc25a39 | 0.165 | sec61g | -0.026 |
| en1a | 0.158 | cirbpb | -0.025 |
| mapk10 | 0.151 | rps27.2 | -0.025 |
| samd4b | 0.150 | tubb4b | -0.024 |
| zgc:113411 | 0.148 | fthl27 | -0.023 |