Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tgm5l | 0.676 | h3f3a | -0.038 |
| il6r | 0.648 | hmgb2a | -0.037 |
| tmem119a | 0.483 | cldnh | -0.037 |
| krt93 | 0.404 | cfl1 | -0.036 |
| parp11 | 0.376 | CR383676.1 | -0.033 |
| si:ch211-108c6.2 | 0.371 | si:ch73-1a9.3 | -0.031 |
| itgb2 | 0.363 | tuba1c | -0.028 |
| SERPINB8 (1 of many) | 0.340 | hmgb1b | -0.028 |
| serpinb1l4 | 0.315 | hmgn2 | -0.028 |
| AL954327.1 | 0.307 | rtn1a | -0.027 |
| LOC110439462 | 0.285 | hmgb3a | -0.027 |
| RF00568 | 0.285 | elavl3 | -0.027 |
| XLOC-039754 | 0.285 | mycbp | -0.027 |
| CU682640.1 | 0.263 | marcksl1b | -0.026 |
| ihhb | 0.262 | gabarapb | -0.025 |
| vwa11 | 0.259 | hmgb2b | -0.025 |
| LOC103910596 | 0.255 | tmsb | -0.025 |
| cldna | 0.246 | tuba1a | -0.024 |
| klf5b | 0.241 | tnrc6c1 | -0.024 |
| zgc:92162 | 0.239 | hsbp1b | -0.024 |
| iffo2b | 0.238 | stmn1b | -0.023 |
| lect2l | 0.234 | ywhae1 | -0.023 |
| zgc:194948 | 0.200 | si:ch211-137a8.4 | -0.023 |
| zbtb7c | 0.198 | vdac3 | -0.023 |
| tgm1l1 | 0.196 | si:ch211-288g17.3 | -0.023 |
| tgm1l3 | 0.195 | ubc | -0.023 |
| edn2 | 0.188 | pvalb5 | -0.023 |
| abrab | 0.178 | atp6v0cb | -0.022 |
| crip2 | 0.174 | h2afy2 | -0.022 |
| LOC108182924 | 0.163 | msi2b | -0.022 |
| etf1a | 0.160 | mdh1aa | -0.022 |
| CT027801.2 | 0.160 | si:ch211-196l7.4 | -0.022 |
| krt94 | 0.156 | marcksb | -0.022 |
| clic3 | 0.152 | hsbp1a | -0.022 |
| zgc:172120 | 0.150 | clstn1 | -0.022 |