Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mir7a-1 | 0.468 | icn | -0.155 |
| cga | 0.459 | gstp1 | -0.121 |
| foxl2a | 0.433 | cd9b | -0.114 |
| adm2a | 0.404 | tuba8l4 | -0.113 |
| si:ch211-57i17.5 | 0.384 | cldnb | -0.107 |
| tshba | 0.364 | tmsb4x | -0.103 |
| dio2 | 0.348 | krt18a.1 | -0.100 |
| tmc2b | 0.343 | phlda2 | -0.100 |
| pitx3 | 0.317 | krt4 | -0.098 |
| zgc:56628 | 0.316 | pfn1 | -0.098 |
| tbx3a | 0.315 | zgc:153867 | -0.097 |
| rgs16 | 0.312 | hmgb2b | -0.094 |
| sync | 0.312 | hmgb2a | -0.093 |
| kcnd1 | 0.299 | lgals3b | -0.093 |
| galr1a | 0.295 | epcam | -0.092 |
| hcn5 | 0.291 | cldn7b | -0.092 |
| LOC100535806 | 0.288 | si:ch211-195b11.3 | -0.090 |
| gata2a | 0.288 | tubb4b | -0.090 |
| scg3 | 0.287 | histh1l | -0.090 |
| tbx20 | 0.284 | bik | -0.089 |
| pou1f1 | 0.283 | abracl | -0.088 |
| gipc3 | 0.271 | s100a10b | -0.086 |
| rasd1 | 0.266 | cfl1l | -0.085 |
| fev | 0.253 | mpc2 | -0.084 |
| si:ch211-163l21.8 | 0.251 | sult6b1 | -0.084 |
| plppr5b | 0.250 | sdc4 | -0.083 |
| XLOC-041269 | 0.242 | sparc | -0.083 |
| kcnk13a | 0.242 | tmsb1 | -0.083 |
| kcnk2a | 0.240 | sox3 | -0.083 |
| mir375-2 | 0.239 | s100v2 | -0.082 |
| syt10 | 0.237 | si:ch73-335l21.4 | -0.080 |
| slc26a10 | 0.236 | her6 | -0.080 |
| si:dkey-104n9.1 | 0.236 | sult2st1 | -0.078 |
| drd1a | 0.233 | mcl1b | -0.078 |
| si:dkey-178e17.3 | 0.233 | jupa | -0.078 |