Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pth1rb | 0.209 | XLOC-003690 | -0.060 |
| nefma | 0.164 | her15.1 | -0.060 |
| mafaa | 0.162 | id1 | -0.059 |
| cplx2l | 0.160 | mdka | -0.056 |
| atp1a3b | 0.159 | cldn5a | -0.054 |
| XLOC-036173 | 0.158 | notch3 | -0.052 |
| si:dkey-10f21.4 | 0.156 | btg2 | -0.051 |
| gpr142 | 0.150 | marcksl1a | -0.050 |
| pcp4a | 0.149 | XLOC-003689 | -0.050 |
| mafba | 0.141 | hmgb2a | -0.050 |
| nefla | 0.136 | sox3 | -0.049 |
| grin1a | 0.134 | hmgb2b | -0.049 |
| kcnc3a | 0.134 | msi1 | -0.047 |
| tdh | 0.132 | XLOC-003692 | -0.046 |
| stmn3 | 0.131 | si:dkey-42i9.4 | -0.046 |
| tubb2 | 0.131 | her4.2 | -0.046 |
| dmrt3a | 0.129 | msna | -0.045 |
| zgc:136410 | 0.129 | si:ch73-281n10.2 | -0.045 |
| npb | 0.127 | cx43.4 | -0.044 |
| LOC559637 | 0.126 | vamp3 | -0.044 |
| stxbp1a | 0.126 | sparc | -0.044 |
| ca2 | 0.125 | sb:cb81 | -0.043 |
| cacna2d3 | 0.122 | gfap | -0.043 |
| si:dkey-56f14.4 | 0.121 | COX7A2 (1 of many) | -0.043 |
| snap25a | 0.120 | hmgn2 | -0.043 |
| tmem178 | 0.118 | her4.1 | -0.042 |
| nrxn1a | 0.117 | sdc4 | -0.042 |
| slc6a5 | 0.116 | sox19a | -0.041 |
| BX247868.1 | 0.116 | lfng | -0.041 |
| rbfox3b | 0.116 | tuba8l | -0.040 |
| nefmb | 0.116 | her12 | -0.040 |
| scn4ba | 0.115 | stmn1a | -0.040 |
| slc35g2b | 0.114 | ran | -0.040 |
| rbfox1 | 0.114 | gpm6bb | -0.039 |
| sncgb | 0.113 | tspan7 | -0.039 |