Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| adamtsl5 | 0.172 | gpm6aa | -0.034 |
| BX296562.2 | 0.154 | rtn1a | -0.033 |
| bmp6 | 0.136 | tuba1c | -0.033 |
| lmx1a | 0.136 | elavl3 | -0.030 |
| col12a1a | 0.135 | tmsb | -0.027 |
| st3gal7 | 0.126 | si:dkey-276j7.1 | -0.026 |
| wnt10b | 0.121 | myt1b | -0.025 |
| rspo3 | 0.118 | nova2 | -0.024 |
| bmp4 | 0.117 | stmn1b | -0.024 |
| col7a1l | 0.116 | hmgb3a | -0.024 |
| fabp11a | 0.111 | stx1b | -0.023 |
| krt18a.1 | 0.106 | dpysl3 | -0.022 |
| CABZ01039096.1 | 0.105 | CU634008.1 | -0.022 |
| bfb | 0.104 | si:ch211-133n4.4 | -0.022 |
| CR626941.1 | 0.103 | hmgb1a | -0.022 |
| b3gnt7l | 0.102 | si:dkey-56m19.5 | -0.022 |
| msx1b | 0.102 | sncb | -0.022 |
| gdf7 | 0.102 | FO082781.1 | -0.022 |
| LOC108182242 | 0.101 | pvalb1 | -0.022 |
| ezra | 0.099 | zgc:165461 | -0.022 |
| crabp2a | 0.098 | gng3 | -0.022 |
| wnt10a | 0.098 | stxbp1a | -0.022 |
| krt8 | 0.096 | snap25a | -0.021 |
| gdf6a | 0.096 | si:ch211-137a8.4 | -0.021 |
| msx2b | 0.096 | CU467822.1 | -0.021 |
| c1qtnf12 | 0.092 | kdm1a | -0.021 |
| syne2a | 0.092 | ywhah | -0.021 |
| loxl2a | 0.091 | vamp2 | -0.021 |
| cdh6 | 0.089 | si:ch211-251b21.1 | -0.021 |
| gdpd5a | 0.088 | sox3 | -0.021 |
| ackr3b | 0.087 | syt2a | -0.021 |
| lmx1bb | 0.087 | dpysl5a | -0.021 |
| si:dkeyp-59c12.1 | 0.086 | tubb5 | -0.021 |
| npr3 | 0.084 | myt1a | -0.020 |
| rspo2 | 0.084 | gapdhs | -0.020 |