Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tac1 | 0.221 | XLOC-003690 | -0.095 |
| slc5a7a | 0.218 | mdka | -0.091 |
| slc18a3a | 0.203 | her15.1 | -0.090 |
| sv2c | 0.188 | id1 | -0.090 |
| mnx1 | 0.179 | hmgb2a | -0.080 |
| ache | 0.176 | rplp1 | -0.078 |
| cntn2 | 0.174 | sox3 | -0.078 |
| chata | 0.174 | rps20 | -0.076 |
| cplx2 | 0.172 | si:dkey-151g10.6 | -0.076 |
| XLOC-036173 | 0.168 | XLOC-003689 | -0.075 |
| cplx2l | 0.166 | cldn5a | -0.075 |
| si:ch211-247j9.1 | 0.166 | msna | -0.073 |
| chga | 0.164 | vamp3 | -0.073 |
| CABZ01074363.1 | 0.159 | notch3 | -0.073 |
| isl2a | 0.159 | btg2 | -0.072 |
| kcnc3a | 0.159 | sparc | -0.072 |
| CABZ01079080.1 | 0.157 | tspan7 | -0.071 |
| stmn2b | 0.157 | si:ch73-281n10.2 | -0.071 |
| rbfox1 | 0.156 | rpl23 | -0.071 |
| atp2b3a | 0.154 | rps7 | -0.071 |
| gabrb4 | 0.153 | msi1 | -0.069 |
| gjd1a | 0.153 | rps2 | -0.069 |
| elavl4 | 0.150 | sdc4 | -0.069 |
| SLC35D3 | 0.149 | her4.2 | -0.068 |
| syt2a | 0.149 | COX7A2 (1 of many) | -0.068 |
| si:ch211-113g11.6 | 0.148 | rps14 | -0.068 |
| si:dkey-85n7.6 | 0.147 | rps15a | -0.067 |
| mnx2a | 0.146 | XLOC-003692 | -0.066 |
| lhx4 | 0.144 | rpl12 | -0.066 |
| gfra3 | 0.143 | rpsa | -0.066 |
| aclya | 0.143 | rpl28 | -0.065 |
| mnx2b | 0.142 | rps3a | -0.065 |
| stmn2a | 0.142 | her4.1 | -0.065 |
| nefmb | 0.142 | rpl7a | -0.065 |
| fndc4b | 0.139 | cd82a | -0.065 |