Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| desmb | 0.107 | hmgb1b | -0.015 |
| csrp1b | 0.106 | marcksb | -0.015 |
| cnn1b | 0.101 | si:ch211-137a8.4 | -0.015 |
| pdlim3a | 0.100 | tuba1c | -0.014 |
| myh11a | 0.091 | nova2 | -0.013 |
| si:ch211-62a1.3 | 0.090 | h2afva | -0.012 |
| mylkb | 0.089 | nono | -0.012 |
| acta2 | 0.087 | nucks1a | -0.012 |
| tagln | 0.084 | seta | -0.012 |
| smtna | 0.083 | si:ch211-288g17.3 | -0.012 |
| lmod1b | 0.080 | tuba1a | -0.012 |
| myocd | 0.070 | chd4a | -0.011 |
| BX901920.1 | 0.069 | elavl3 | -0.011 |
| XLOC-041870 | 0.069 | hes6 | -0.011 |
| pln | 0.067 | hmgb3a | -0.011 |
| fhl1a | 0.063 | hnrnpa0a | -0.011 |
| myl9a | 0.062 | si:dkey-276j7.1 | -0.011 |
| cald1b | 0.062 | smarce1 | -0.011 |
| BX323087.1 | 0.061 | sox11b | -0.011 |
| arhgap20b | 0.059 | cadm3 | -0.010 |
| BX322618.1 | 0.058 | cbx3a | -0.010 |
| BX908750.1 | 0.058 | gpm6aa | -0.010 |
| BX005183.3 | 0.057 | hbbe1.3 | -0.010 |
| pgm5 | 0.056 | hdac1 | -0.010 |
| XLOC-025423 | 0.056 | hp1bp3 | -0.010 |
| kng1 | 0.055 | mex3b | -0.010 |
| XLOC-002639 | 0.055 | rbbp4 | -0.010 |
| BX088707.3 | 0.054 | rcc2 | -0.010 |
| tpm1 | 0.052 | sox3 | -0.010 |
| kcnk18 | 0.051 | tmeff1b | -0.010 |
| ckba | 0.048 | tmpob | -0.010 |
| BX248082.1 | 0.048 | tmsb | -0.010 |
| cbln9 | 0.045 | top1l | -0.010 |
| gucy1a1 | 0.044 | tp53inp2 | -0.010 |
| si:ch211-170d8.5 | 0.044 | tubb5 | -0.010 |