Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC103909443 | 0.069 | hmga1a | -0.014 |
| fev | 0.066 | sox11b | -0.013 |
| lmx1ba | 0.064 | rps18 | -0.012 |
| XLOC-043742 | 0.063 | mab21l2 | -0.011 |
| eomesa | 0.051 | eif5a2 | -0.011 |
| tbr1a | 0.050 | snrpd1 | -0.011 |
| XLOC-004681 | 0.049 | hnrnpa1b | -0.010 |
| tph2 | 0.048 | rps6 | -0.010 |
| CDHR1 (1 of many) | 0.047 | hmgb2a | -0.009 |
| LOC108179784 | 0.046 | cx43.4 | -0.009 |
| LOC110439864 | 0.040 | taf15 | -0.009 |
| lmx1al | 0.039 | tgif1 | -0.009 |
| tbr1b | 0.038 | nop2 | -0.009 |
| entpd5a | 0.038 | cxxc5b | -0.009 |
| calb2a | 0.036 | cirbpa | -0.009 |
| dhx58 | 0.035 | ncl | -0.009 |
| slc6a4a | 0.035 | scrt1a | -0.009 |
| fmn2a | 0.034 | plxna4 | -0.009 |
| XLOC-018373 | 0.034 | alcamb | -0.009 |
| fcer1g | 0.032 | si:dkey-151g10.6 | -0.008 |
| BX323861.3 | 0.032 | rpl38 | -0.008 |
| si:dkey-28d5.12 | 0.032 | metap2b | -0.008 |
| bcl11ba | 0.032 | ilf3b | -0.008 |
| chs1 | 0.031 | spsb4a | -0.008 |
| znf973 | 0.031 | rrp1 | -0.008 |
| ralyl | 0.031 | thrap3b | -0.008 |
| yjefn3 | 0.031 | tcf7l2 | -0.008 |
| zhx2b | 0.031 | meis2b | -0.008 |
| sema3c | 0.030 | srrt | -0.008 |
| ajap1 | 0.030 | fbl | -0.008 |
| camkvl | 0.030 | stm | -0.008 |
| LOC108183607 | 0.030 | gpatch4 | -0.008 |
| LOC101884899 | 0.029 | eif4bb | -0.008 |
| LOC100537263 | 0.029 | rbfox3a | -0.008 |
| znf804a | 0.029 | rsl1d1 | -0.008 |