Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pde11al | 0.535 | ptmab | -0.059 |
| tmem54b | 0.508 | epcam | -0.056 |
| meox2b | 0.488 | ddx5 | -0.049 |
| slc47a1 | 0.454 | cox7c | -0.049 |
| LOC110438049 | 0.406 | ndufa4l | -0.048 |
| emp3b | 0.391 | khdrbs1a | -0.042 |
| cspg4 | 0.385 | oaz1a | -0.041 |
| CU693494.2 | 0.367 | cct5 | -0.041 |
| tubb6 | 0.358 | hmgb1a | -0.040 |
| mfap4 | 0.329 | h3f3a | -0.039 |
| htra3b | 0.327 | tubb2b | -0.038 |
| ifitm1 | 0.307 | si:ch73-1a9.3 | -0.037 |
| CABZ01068367.1 | 0.294 | tegt | -0.036 |
| rspo2 | 0.287 | f11r.1 | -0.036 |
| mir214a | 0.271 | hmgb1b | -0.036 |
| gsc | 0.268 | fthl27 | -0.035 |
| si:ch211-272b8.6 | 0.268 | ucp2 | -0.034 |
| LOC110437926 | 0.265 | cox5ab | -0.034 |
| aldh8a1 | 0.264 | psma4 | -0.034 |
| CR855337.1 | 0.263 | cldn7b | -0.034 |
| foxf1 | 0.240 | itm2ba | -0.033 |
| BX322661.2 | 0.233 | erh | -0.033 |
| XLOC-042219 | 0.231 | cox7b | -0.033 |
| si:ch211-212k18.8 | 0.228 | ywhabb | -0.033 |
| nppc | 0.226 | cox5aa | -0.033 |
| si:dkey-9i23.16 | 0.224 | si:dkey-42i9.4 | -0.033 |
| f13a1b | 0.222 | tomm7 | -0.033 |
| FQ323119.1 | 0.220 | ssr2 | -0.032 |
| orai1a | 0.214 | ddx39aa | -0.032 |
| foxc1b | 0.209 | ube2e1 | -0.032 |
| zgc:193690 | 0.205 | snrpb | -0.032 |
| BX088707.3 | 0.204 | csnk2b | -0.032 |
| XLOC-020301 | 0.200 | psma6a | -0.032 |
| ucmab | 0.196 | hsbp1b | -0.032 |
| arhgap31 | 0.195 | syf2 | -0.032 |