Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-212k5.1 | 0.805 | mt-cyb | -0.045 |
| tdrd9 | 0.751 | cox8a | -0.042 |
| slc5a7a | 0.732 | vdac2 | -0.038 |
| LO017711.1 | 0.691 | ndufa6 | -0.033 |
| XLOC-007573 | 0.676 | cox5ab | -0.033 |
| pde5aa | 0.663 | ppdpfb | -0.033 |
| BX001026.1 | 0.498 | cox7a2a | -0.032 |
| phf19 | 0.496 | atp5mc1 | -0.032 |
| prg4b | 0.443 | spint2 | -0.030 |
| onecut3a | 0.428 | ndufb4 | -0.030 |
| cntnap5b | 0.419 | mdh2 | -0.030 |
| CR812832.1 | 0.398 | ybx1 | -0.029 |
| BX927404.1 | 0.388 | cox7a2l | -0.029 |
| lrrfip1b | 0.385 | uqcrh | -0.029 |
| zp3d.1 | 0.361 | ndufb7 | -0.028 |
| trim46a | 0.327 | hmgn6 | -0.027 |
| tmeff2b | 0.319 | prdx3 | -0.027 |
| glra1 | 0.313 | ndufa2 | -0.027 |
| CABZ01067581.1 | 0.309 | rnf10 | -0.027 |
| si:ch73-290k24.5 | 0.304 | ndufb3 | -0.026 |
| neu3.1 | 0.303 | ndufa12 | -0.025 |
| map6a | 0.300 | mpc2 | -0.025 |
| b4galnt4a | 0.289 | sod1 | -0.025 |
| cacna2d1a | 0.287 | ndufa8 | -0.025 |
| hoxc6b | 0.285 | mcl1a | -0.025 |
| shank1 | 0.282 | atf4a | -0.025 |
| spegb | 0.275 | ywhabb | -0.025 |
| dnajb4 | 0.272 | sdhb | -0.025 |
| camk2n2 | 0.271 | atp5if1a | -0.025 |
| tpcn1 | 0.261 | gabarapb | -0.024 |
| XLOC-022188 | 0.261 | ndufa5 | -0.024 |
| XLOC-041348 | 0.259 | cldnh | -0.024 |
| sgcb | 0.254 | icn | -0.024 |
| LO018181.1 | 0.251 | cox17 | -0.024 |
| kif3cb | 0.248 | sdhc | -0.024 |