| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pcdh19 | 0.279 | gpm6ab | -0.104 |
| notch3 | 0.167 | stmn1b | -0.098 |
| plp1a | 0.165 | rnasekb | -0.092 |
| XLOC-003689 | 0.161 | gabarapl2 | -0.089 |
| nkx2.9 | 0.156 | acbd7 | -0.087 |
| XLOC-003690 | 0.153 | ckbb | -0.085 |
| cldn5a | 0.152 | tuba8l3 | -0.084 |
| lrrn1 | 0.147 | onecut1 | -0.083 |
| si:ch73-21g5.7 | 0.146 | gng3 | -0.081 |
| sox3 | 0.146 | atp5if1b | -0.080 |
| col11a1a | 0.144 | atp6v1e1b | -0.078 |
| sb:cb81 | 0.144 | mllt11 | -0.078 |
| nrarpb | 0.139 | elavl4 | -0.078 |
| nkx2.2b | 0.136 | vamp2 | -0.077 |
| sox19a | 0.135 | stxbp1a | -0.077 |
| her15.1 | 0.131 | nhlh2 | -0.076 |
| ntn1a | 0.124 | nsg2 | -0.076 |
| XLOC-003692 | 0.120 | cadm4 | -0.075 |
| helt | 0.120 | calm1a | -0.075 |
| sdc4 | 0.120 | atp6v0cb | -0.074 |
| notch1b | 0.120 | jagn1a | -0.074 |
| abhd6a | 0.118 | cotl1 | -0.073 |
| hmgb2a | 0.116 | LOC100537384 | -0.073 |
| akap12b | 0.112 | snap25a | -0.073 |
| ptch2 | 0.111 | si:dkeyp-75h12.5 | -0.072 |
| id1 | 0.110 | gabarapb | -0.072 |
| her12 | 0.110 | csdc2a | -0.072 |
| mir219-3 | 0.109 | sncb | -0.071 |
| si:ch211-286o17.1 | 0.109 | ywhah | -0.071 |
| zbtb16a | 0.108 | ppdpfb | -0.071 |
| lfng | 0.104 | fez1 | -0.071 |
| btg2 | 0.104 | cplx2l | -0.071 |
| npas1 | 0.103 | glula | -0.070 |
| si:ch211-212k18.5 | 0.102 | atpv0e2 | -0.070 |
| nkx2.2a | 0.102 | atp6v1g1 | -0.070 |