Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pcolceb | 0.518 | hmgb2b | -0.014 |
| tnxba | 0.495 | rps18 | -0.014 |
| wisp3 | 0.495 | pfdn4 | -0.014 |
| mia | 0.474 | marcksl1b | -0.014 |
| matn1 | 0.449 | hmgn6 | -0.014 |
| acana | 0.444 | st14a | -0.013 |
| CU570976.1 | 0.423 | rps28 | -0.013 |
| itih1 | 0.423 | atp5if1a | -0.013 |
| acanb | 0.423 | rpl5b | -0.013 |
| CYTL1 | 0.411 | tgif1 | -0.013 |
| snorc | 0.385 | si:dkey-42i9.4 | -0.013 |
| itih6 | 0.362 | si:ch211-222l21.1 | -0.013 |
| col11a2 | 0.361 | dut | -0.013 |
| otos | 0.359 | arid3c | -0.012 |
| fgfbp2b | 0.337 | ptk2bb | -0.012 |
| cthrc1b | 0.333 | syncrip | -0.012 |
| col9a1a | 0.321 | mir205 | -0.012 |
| omgb | 0.316 | hmga1a | -0.012 |
| col9a3 | 0.311 | slc20a1b | -0.012 |
| col9a2 | 0.287 | snrpf | -0.012 |
| si:dkey-31g6.6 | 0.286 | dzip1 | -0.011 |
| si:dkey-6n6.1 | 0.270 | smarce1 | -0.011 |
| LOC110438125 | 0.269 | hmgb3a | -0.011 |
| LOC100330861 | 0.266 | khdrbs1a | -0.011 |
| meltf | 0.249 | dnase1l4.1 | -0.011 |
| LOC103910196 | 0.235 | gbp | -0.011 |
| AL929222.2 | 0.233 | ddx39ab | -0.011 |
| scin | 0.232 | chrac1 | -0.011 |
| ptgdsa | 0.231 | snrpb | -0.011 |
| csgalnact1a | 0.230 | morf4l1 | -0.011 |
| col2a1a | 0.228 | khsrp | -0.011 |
| UST (1 of many) | 0.228 | zgc:110216 | -0.011 |
| CR376748.1 | 0.223 | snrnp70 | -0.011 |
| il16 | 0.222 | CABZ01072614.1 | -0.011 |
| epyc | 0.220 | polr2h | -0.011 |