Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| neurod6b | 0.098 | hmgb2a | -0.034 |
| tcf4 | 0.087 | pcna | -0.032 |
| nfixb | 0.084 | si:dkey-151g10.6 | -0.032 |
| nfia | 0.074 | rps12 | -0.031 |
| neurod2 | 0.074 | rps28 | -0.031 |
| neurod6a | 0.069 | si:ch73-386h18.1 | -0.031 |
| cyp2x8 | 0.069 | rps27a | -0.031 |
| neurod1 | 0.064 | rplp2l | -0.030 |
| LOC103909284 | 0.062 | zfhx4 | -0.030 |
| LOC110438010 | 0.056 | eef1a1l1 | -0.030 |
| CABZ01077176.1 | 0.052 | zfhx3 | -0.029 |
| si:dkey-29d5.2 | 0.048 | rpl12 | -0.029 |
| CU467822.1 | 0.045 | anp32b | -0.029 |
| CR848047.1 | 0.044 | id1 | -0.029 |
| znf536 | 0.044 | stmn1a | -0.029 |
| CABZ01117603.1 | 0.044 | rps19 | -0.028 |
| LOC110438926 | 0.042 | rps2 | -0.028 |
| LOC101884718 | 0.042 | ranbp1 | -0.027 |
| myt1la | 0.041 | dkc1 | -0.027 |
| gpm6aa | 0.039 | rpl4 | -0.027 |
| zfpm2a | 0.039 | ccnd1 | -0.027 |
| stmn1b | 0.039 | rplp1 | -0.027 |
| bhlhe22 | 0.039 | selenoh | -0.027 |
| r3hdm1 | 0.038 | rpl6 | -0.027 |
| si:ch211-226h7.5 | 0.038 | rpl35a | -0.027 |
| rtn1a | 0.038 | msna | -0.027 |
| ckbb | 0.038 | nop58 | -0.026 |
| LO017877.1 | 0.037 | chaf1a | -0.026 |
| cbln2a | 0.037 | foxp4 | -0.026 |
| gpm6ab | 0.037 | banf1 | -0.026 |
| eomesa | 0.037 | rplp0 | -0.026 |
| sox4a | 0.036 | rpl38 | -0.026 |
| LOC110439507 | 0.036 | rpl32 | -0.026 |
| BX545917.1 | 0.035 | eif5a2 | -0.026 |
| si:dkey-56f14.7 | 0.035 | mcm7 | -0.026 |