Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| elavl3 | 0.046 | hmgb2a | -0.041 |
| stmn1b | 0.045 | pcna | -0.036 |
| sox4a | 0.042 | id1 | -0.035 |
| rtn1a | 0.042 | anp32b | -0.031 |
| tubb5 | 0.040 | rrm1 | -0.031 |
| ywhah | 0.039 | selenoh | -0.031 |
| BX537115.1 | 0.039 | si:ch73-281n10.2 | -0.031 |
| gpm6ab | 0.038 | nop58 | -0.031 |
| tmsb | 0.038 | banf1 | -0.031 |
| adam22 | 0.037 | npm1a | -0.031 |
| elavl4 | 0.037 | chaf1a | -0.031 |
| tuba1c | 0.037 | ccnd1 | -0.030 |
| BX511073.1 | 0.036 | msna | -0.030 |
| BX571675.1 | 0.036 | snu13b | -0.030 |
| rtn1b | 0.036 | tuba8l4 | -0.029 |
| thsd7aa | 0.036 | tuba8l | -0.029 |
| gpm6aa | 0.036 | stmn1a | -0.029 |
| tmeff1b | 0.036 | rpa3 | -0.029 |
| celf3a | 0.035 | ranbp1 | -0.029 |
| neurod1 | 0.035 | mki67 | -0.029 |
| fam168a | 0.035 | sox3 | -0.029 |
| dpysl3 | 0.035 | lig1 | -0.029 |
| CR407561.2 | 0.034 | nutf2l | -0.028 |
| gng3 | 0.034 | sox19a | -0.028 |
| ptmaa | 0.034 | dkc1 | -0.027 |
| jpt1b | 0.034 | anp32a | -0.027 |
| gmip | 0.033 | fbl | -0.027 |
| ing4 | 0.033 | fen1 | -0.027 |
| myt1a | 0.033 | mdka | -0.027 |
| zc4h2 | 0.033 | ccna2 | -0.027 |
| kdm6bb | 0.032 | dut | -0.027 |
| gpc1a | 0.032 | nop56 | -0.027 |
| ptprsb | 0.032 | mcm3 | -0.026 |
| si:dkey-81l17.6 | 0.032 | rsl1d1 | -0.026 |
| hmgb3a | 0.032 | mcm6 | -0.026 |