Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col1a1b | 0.194 | khdrbs1a | -0.133 |
| col1a1a | 0.185 | hmgb2b | -0.127 |
| col1a2 | 0.184 | h2afvb | -0.126 |
| aqp3a | 0.183 | snrpd1 | -0.125 |
| col11a1a | 0.183 | ddx39ab | -0.124 |
| sparc | 0.178 | h2afva | -0.124 |
| col4a5 | 0.177 | apex1 | -0.124 |
| cotl1 | 0.170 | hnrnpa0l | -0.124 |
| col14a1b | 0.166 | ptges3b | -0.122 |
| cldn1 | 0.165 | snrpf | -0.120 |
| itgav | 0.161 | h3f3d | -0.120 |
| rbp4 | 0.160 | hmgn6 | -0.120 |
| col4a6 | 0.159 | hmga1a | -0.120 |
| epgn | 0.156 | snrpb | -0.120 |
| col2a1b | 0.155 | snrpe | -0.119 |
| krt5 | 0.154 | h3f3a | -0.119 |
| si:dkey-33c14.3 | 0.153 | hmgn2 | -0.118 |
| pfn1 | 0.151 | snrpd2 | -0.118 |
| rac2 | 0.151 | ilf2 | -0.118 |
| postnb | 0.150 | setb | -0.115 |
| anxa1a | 0.150 | cbx3a | -0.115 |
| gapdhs | 0.149 | marcksb | -0.115 |
| itgb1b.1 | 0.148 | rbm8a | -0.114 |
| col5a1 | 0.148 | hnrnpaba | -0.114 |
| tmsb1 | 0.148 | snrpg | -0.113 |
| itgb4 | 0.147 | hnrnpabb | -0.113 |
| krt91 | 0.147 | si:ch211-51e12.7 | -0.111 |
| cavin1b | 0.145 | krt18a.1 | -0.108 |
| hcls1 | 0.143 | hmgb2a | -0.106 |
| s100a10b | 0.143 | ddx39aa | -0.106 |
| VIT | 0.142 | phf5a | -0.106 |
| tmsb4x | 0.142 | nucks1a | -0.106 |
| itgb3a | 0.142 | hnrnpa0b | -0.105 |
| col5a2a | 0.140 | sf3b5 | -0.104 |
| si:dkey-102c8.3 | 0.139 | hmgb3a | -0.104 |