| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| SLC35D3 | 0.461 | XLOC-003690 | -0.152 |
| sema3c | 0.370 | her15.1 | -0.143 |
| tac1 | 0.364 | id1 | -0.138 |
| stmn3 | 0.337 | mdka | -0.132 |
| tbx3a | 0.335 | sox3 | -0.129 |
| si:dkey-85n7.6 | 0.329 | cldn5a | -0.122 |
| onecut3a | 0.315 | XLOC-003689 | -0.121 |
| chga | 0.313 | notch3 | -0.116 |
| tecrl2a | 0.307 | her4.2 | -0.112 |
| slc5a7a | 0.305 | hmgb2b | -0.111 |
| slc18a3a | 0.293 | her4.1 | -0.109 |
| cplx2l | 0.291 | msi1 | -0.109 |
| gfra1b | 0.291 | XLOC-003692 | -0.108 |
| XLOC-016165 | 0.287 | sox19a | -0.107 |
| tbx3b | 0.285 | si:dkey-151g10.6 | -0.105 |
| si:ch211-113g11.6 | 0.284 | hmgb2a | -0.104 |
| sv2c | 0.282 | rplp1 | -0.103 |
| s100a1 | 0.278 | CU467822.1 | -0.102 |
| chrna2b | 0.274 | lfng | -0.101 |
| XLOC-036173 | 0.269 | gfap | -0.101 |
| syt12 | 0.268 | sb:cb81 | -0.101 |
| si:ch211-56a11.2 | 0.266 | zgc:165461 | -0.101 |
| chodl | 0.264 | her12 | -0.099 |
| si:ch211-247j9.1 | 0.258 | ybx1 | -0.099 |
| ache | 0.258 | rpl23 | -0.098 |
| ptger4c | 0.257 | COX7A2 (1 of many) | -0.098 |
| lin28a | 0.252 | rpl13 | -0.097 |
| layna | 0.250 | tspan7 | -0.096 |
| spock3 | 0.243 | gpm6bb | -0.096 |
| sema3e | 0.242 | snrpf | -0.096 |
| npr2 | 0.238 | rps20 | -0.095 |
| sv2bb | 0.236 | sox2 | -0.094 |
| nefmb | 0.232 | ran | -0.094 |
| si:dkey-10f21.4 | 0.232 | atp1a1b | -0.093 |
| calca | 0.232 | si:ch73-281n10.2 | -0.093 |