Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cotl1 | 0.145 | snrpd1 | -0.090 |
| aqp3a | 0.135 | h3f3d | -0.090 |
| col1a1b | 0.133 | eef1a1l1 | -0.090 |
| col1a2 | 0.131 | hsp90ab1 | -0.086 |
| postnb | 0.131 | snrpb | -0.084 |
| rbp4 | 0.128 | khdrbs1a | -0.083 |
| aep1 | 0.128 | snrpf | -0.083 |
| capgb | 0.128 | apex1 | -0.082 |
| col11a1a | 0.128 | hmgb2b | -0.081 |
| itgb1b.2 | 0.127 | snu13b | -0.080 |
| krt5 | 0.126 | rpl26 | -0.077 |
| col1a1a | 0.125 | krt18a.1 | -0.077 |
| krtt1c19e | 0.122 | atp5if1a | -0.076 |
| sparc | 0.122 | smarce1 | -0.075 |
| col14a1b | 0.121 | npm1a | -0.075 |
| col2a1b | 0.121 | hnrnpa0l | -0.075 |
| tmsb1 | 0.120 | si:dkey-42i9.4 | -0.075 |
| capn2a | 0.119 | setb | -0.075 |
| gapdhs | 0.115 | rpl23 | -0.074 |
| s100a10b | 0.115 | marcksb | -0.074 |
| entpd3 | 0.114 | ddx39ab | -0.074 |
| spaca4l | 0.114 | cct3 | -0.074 |
| cavin1b | 0.114 | hnrnpa0b | -0.074 |
| col4a5 | 0.113 | hnrnpaba | -0.073 |
| lum | 0.113 | ran | -0.073 |
| itgb4 | 0.112 | rplp0 | -0.073 |
| wu:fa03e10 | 0.112 | cirbpb | -0.072 |
| col4a6 | 0.112 | nop58 | -0.072 |
| cxl34b.11 | 0.111 | hdac1 | -0.072 |
| col17a1a | 0.111 | cct2 | -0.072 |
| cap1 | 0.110 | snrpe | -0.072 |
| kera | 0.110 | si:ch211-51e12.7 | -0.071 |
| pfn1 | 0.109 | rps23 | -0.071 |
| si:dkey-95h12.1 | 0.109 | srsf5a | -0.071 |
| capns1a | 0.109 | rpl12 | -0.071 |