Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-245j22.3 | 0.265 | hmgn2 | -0.035 |
| exorh | 0.211 | hnrnpaba | -0.031 |
| tph2 | 0.198 | marcksl1b | -0.030 |
| si:ch211-263p13.7 | 0.165 | cirbpb | -0.029 |
| asmt | 0.157 | marcksl1a | -0.029 |
| CABZ01109058.1 | 0.155 | h2afvb | -0.027 |
| rcvrnb | 0.151 | actb2 | -0.027 |
| si:ch211-265g22.4 | 0.150 | h3f3d | -0.026 |
| CR854897.1 | 0.149 | hnrnpa0l | -0.026 |
| tshba | 0.131 | actb1 | -0.025 |
| XLOC-023769 | 0.126 | h3f3a | -0.025 |
| gch1 | 0.124 | hsp90ab1 | -0.025 |
| LOC108183529 | 0.115 | si:ch211-288g17.3 | -0.024 |
| CABZ01083546.1 | 0.114 | khdrbs1a | -0.024 |
| unc119.2 | 0.111 | hmgb1b | -0.024 |
| BX004774.2 | 0.110 | ubc | -0.023 |
| tph1a | 0.110 | smarce1 | -0.022 |
| slc24a1 | 0.105 | rpl30 | -0.021 |
| LOC110439848 | 0.101 | tubb2b | -0.021 |
| LOC101882070 | 0.091 | rps16 | -0.021 |
| pde6ga | 0.089 | hmgb2b | -0.021 |
| cplx4c | 0.088 | h2afva | -0.021 |
| CR855277.2 | 0.087 | gpm6aa | -0.021 |
| saga | 0.086 | rps23 | -0.021 |
| slc5a12 | 0.084 | rplp0 | -0.021 |
| gngt1 | 0.083 | si:ch211-222l21.1 | -0.021 |
| cfi | 0.081 | slc25a3b | -0.020 |
| si:ch73-308m11.1 | 0.080 | rpl14 | -0.020 |
| cnga1a | 0.077 | ptmab | -0.020 |
| parapinopsinb | 0.077 | ran | -0.020 |
| cracr2b | 0.077 | rps9 | -0.020 |
| XLOC-036926 | 0.077 | fkbp1aa | -0.020 |
| gnat1 | 0.075 | rps12 | -0.020 |
| ora3 | 0.074 | rpl9 | -0.019 |
| ddc | 0.071 | hmga1a | -0.019 |