Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| SHC3 | 0.597 | rps16 | -0.086 |
| LOC793648 | 0.469 | mt-co1 | -0.080 |
| rxrab | 0.440 | zgc:193541 | -0.074 |
| LOC110437744.1 | 0.423 | NC-002333.4 | -0.074 |
| mapta | 0.331 | mt-nd1 | -0.072 |
| si:ch73-266f23.1 | 0.328 | rps27a | -0.071 |
| znf1023 | 0.328 | rpl23 | -0.071 |
| si:ch73-288o11.4 | 0.312 | cox6b2 | -0.071 |
| XLOC-030237 | 0.305 | rpl3 | -0.071 |
| si:ch73-252p3.1 | 0.296 | COX5B | -0.070 |
| sept9b | 0.294 | atp5l | -0.070 |
| sncaip | 0.294 | atp5mc1 | -0.070 |
| slc6a4a | 0.274 | rps14 | -0.069 |
| slc37a4a | 0.268 | rps21 | -0.068 |
| LOC110439448 | 0.262 | COX3 | -0.067 |
| LOC101883323 | 0.259 | si:dkey-33i11.4 | -0.066 |
| vsnl1b | 0.240 | cox8a | -0.066 |
| mlxip | 0.226 | ndufb8 | -0.066 |
| LOC103909796 | 0.223 | rps15 | -0.063 |
| tmem41ab | 0.221 | atp5if1a | -0.063 |
| BX571884.1 | 0.217 | ndufb3 | -0.062 |
| ptpn18 | 0.217 | cox6c | -0.062 |
| slc39a3.1 | 0.215 | mt-nd2 | -0.062 |
| gfap | 0.212 | atp5meb | -0.061 |
| gnat1 | 0.210 | ndufa6 | -0.061 |
| ly6m5 | 0.208 | cox7b | -0.060 |
| LOC108190702 | 0.206 | mt-cyb | -0.060 |
| polrmt | 0.197 | atp5pf | -0.060 |
| gldc | 0.192 | rps9 | -0.060 |
| si:dkey-234i14.3 | 0.188 | cox5ab | -0.059 |
| tyrp1b | 0.188 | cox6a1 | -0.059 |
| enc3 | 0.186 | ndufab1b | -0.059 |
| col9a3 | 0.185 | mt-atp6 | -0.058 |
| prkacab | 0.184 | atp1b1b | -0.058 |
| vsir | 0.181 | rpl27 | -0.057 |