Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| aep1 | 0.173 | khdrbs1a | -0.100 |
| col11a1a | 0.171 | cldnb | -0.097 |
| col2a1b | 0.171 | ran | -0.096 |
| col7a1 | 0.167 | hsp90ab1 | -0.095 |
| postnb | 0.165 | hnrnpabb | -0.093 |
| col1a1b | 0.158 | hmgb1b | -0.091 |
| thy1 | 0.156 | eef1a1l1 | -0.090 |
| pleca | 0.155 | hmgb2b | -0.089 |
| col1a2 | 0.155 | prdx2 | -0.089 |
| cyt1l | 0.153 | nme2b.1 | -0.087 |
| col28a2a | 0.150 | btf3 | -0.086 |
| col1a1a | 0.150 | hnrnpa0l | -0.085 |
| cotl1 | 0.148 | rpl21 | -0.083 |
| ecrg4b | 0.147 | cirbpb | -0.083 |
| col5a1 | 0.146 | rbm8a | -0.082 |
| col5a3b | 0.146 | h3f3a | -0.081 |
| col12a1b | 0.144 | fthl27 | -0.081 |
| pfn1 | 0.144 | slc25a5 | -0.081 |
| kera | 0.142 | nhp2 | -0.081 |
| spaca4l | 0.142 | setb | -0.081 |
| dcn | 0.141 | ddx39aa | -0.081 |
| VIT | 0.141 | ddx39ab | -0.081 |
| hcls1 | 0.141 | snrpd1 | -0.080 |
| col18a1a | 0.141 | cct2 | -0.080 |
| actb1 | 0.138 | hmgb3b | -0.080 |
| DSG2 | 0.138 | snrpd2 | -0.079 |
| igfbp2a | 0.138 | snu13b | -0.079 |
| myh9a | 0.138 | syncrip | -0.079 |
| lum | 0.138 | rplp1 | -0.079 |
| padi2 | 0.138 | slc25a3b | -0.079 |
| tmsb4x | 0.138 | hdac1 | -0.079 |
| col16a1 | 0.137 | rpl23 | -0.078 |
| si:dkey-16p21.8 | 0.137 | rps27a | -0.078 |
| lrata | 0.136 | prmt1 | -0.078 |
| krt4 | 0.134 | cdkn2aipnl | -0.078 |