Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax8 | 0.145 | XLOC-003690 | -0.071 |
| si:dkey-234i14.2 | 0.137 | id1 | -0.069 |
| pax2a | 0.120 | si:dkey-151g10.6 | -0.068 |
| wt1a | 0.117 | her15.1 | -0.066 |
| rtn1b | 0.114 | rplp1 | -0.064 |
| slc32a1 | 0.113 | mdka | -0.064 |
| sncgb | 0.111 | hmgb2a | -0.061 |
| CR377229.1 | 0.109 | rpl23 | -0.060 |
| mab21l2 | 0.107 | cldn5a | -0.060 |
| tmem59l | 0.104 | rps15a | -0.059 |
| rbfox1 | 0.103 | XLOC-003689 | -0.059 |
| stx1b | 0.102 | rpl39 | -0.058 |
| slc6a5 | 0.102 | sox3 | -0.058 |
| slc35g2a | 0.102 | rpl12 | -0.056 |
| nkx1.2lb | 0.102 | rpl10a | -0.056 |
| ywhag2 | 0.101 | msna | -0.056 |
| cplx2 | 0.100 | rpl11 | -0.055 |
| snap25a | 0.100 | notch3 | -0.055 |
| gng3 | 0.099 | rpl7 | -0.055 |
| elavl4 | 0.098 | rps24 | -0.055 |
| cacna2d3 | 0.098 | rpl26 | -0.054 |
| gpc1a | 0.096 | rplp2l | -0.054 |
| atp6v0cb | 0.096 | COX7A2 (1 of many) | -0.054 |
| znf385c | 0.095 | zgc:56493 | -0.053 |
| eno2 | 0.095 | rpl37 | -0.053 |
| rbfox3a | 0.094 | rplp0 | -0.052 |
| vamp2 | 0.094 | rps10 | -0.052 |
| ywhah | 0.094 | vamp3 | -0.052 |
| sncb | 0.093 | msi1 | -0.051 |
| neurod6b | 0.092 | tspan7 | -0.051 |
| otpb | 0.092 | sparc | -0.051 |
| kcnc3a | 0.092 | XLOC-003692 | -0.051 |
| gbx2 | 0.090 | rps20 | -0.051 |
| cplx2l | 0.090 | eef1a1l1 | -0.050 |
| cdk5r1b | 0.089 | rps2 | -0.050 |