| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx5a | 0.251 | calm1b | -0.160 |
| her12 | 0.247 | calb2a | -0.149 |
| sp8a | 0.244 | txn | -0.146 |
| sp8b | 0.230 | cldnh | -0.143 |
| col14a1a | 0.217 | crip1 | -0.135 |
| tnn | 0.217 | gng13a | -0.132 |
| her4.1 | 0.209 | gstp1 | -0.125 |
| her2 | 0.205 | prox1a | -0.121 |
| dlx6a | 0.203 | tprg1 | -0.119 |
| dlx3b | 0.198 | gnb3a | -0.118 |
| id1 | 0.195 | avil | -0.118 |
| fgf8a | 0.195 | LOC100536671 | -0.117 |
| dkc1 | 0.187 | ociad2 | -0.117 |
| gas1a | 0.187 | pou2f3 | -0.115 |
| si:dkey-261h17.1 | 0.187 | bik | -0.115 |
| mycn | 0.187 | gsto2 | -0.114 |
| fezf1 | 0.187 | rgs1 | -0.114 |
| otx1 | 0.184 | anxa5b | -0.114 |
| fgf10a | 0.182 | si:dkey-19b23.12 | -0.114 |
| lmo4b | 0.179 | si:dkey-87o1.2 | -0.113 |
| XLOC-032526 | 0.171 | zgc:165423 | -0.112 |
| si:ch211-243g18.2 | 0.169 | shha | -0.112 |
| her15.1 | 0.167 | mvp | -0.112 |
| zgc:63972 | 0.166 | pitx1 | -0.112 |
| akap12b | 0.165 | itpkb | -0.111 |
| six4b | 0.163 | icn | -0.110 |
| LOC798089 | 0.163 | trpm5 | -0.110 |
| selenoh | 0.161 | spint2 | -0.109 |
| XLOC-039121 | 0.161 | hopx | -0.109 |
| npm1a | 0.160 | ponzr6 | -0.109 |
| plekhh1 | 0.158 | wu:fb18f06 | -0.108 |
| lyar | 0.156 | zgc:171929 | -0.108 |
| XLOC-003690 | 0.155 | myl9a | -0.108 |
| sox3 | 0.154 | eml2 | -0.108 |
| six1b | 0.154 | si:dkeyp-72h1.1 | -0.107 |