| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax2a | 0.368 | id1 | -0.135 |
| otpa | 0.282 | cd81a | -0.117 |
| otpb | 0.281 | fosab | -0.117 |
| pax8 | 0.280 | msna | -0.114 |
| lhx1a | 0.276 | cd82a | -0.107 |
| pax2b | 0.273 | qki2 | -0.106 |
| slc32a1 | 0.238 | cldn5a | -0.105 |
| scrt1a | 0.226 | XLOC-003690 | -0.105 |
| jag1a | 0.218 | vamp3 | -0.102 |
| prdm8b | 0.217 | cd63 | -0.100 |
| scrt2 | 0.210 | fabp7a | -0.099 |
| si:ch73-386h18.1 | 0.202 | her6 | -0.099 |
| elavl3 | 0.198 | sdc4 | -0.098 |
| XLOC-005615 | 0.196 | sox2 | -0.094 |
| nhlh2 | 0.194 | her9 | -0.091 |
| sox14 | 0.189 | jun | -0.090 |
| slc6a5 | 0.187 | atp1a1b | -0.090 |
| lhx5 | 0.183 | wls | -0.090 |
| slc30a2 | 0.177 | notch3 | -0.089 |
| hoxb9a | 0.177 | msi1 | -0.089 |
| XLOC-028064 | 0.173 | ccng1 | -0.088 |
| myt1b | 0.172 | selenoh | -0.087 |
| zfhx3 | 0.172 | tuba8l4 | -0.087 |
| stap2a | 0.163 | atp1b1a | -0.087 |
| stx1b | 0.162 | COX7A2 (1 of many) | -0.086 |
| ube2ql1 | 0.161 | metrnla | -0.086 |
| hoxa9a | 0.161 | akap12b | -0.086 |
| esrrga | 0.160 | zgc:165461 | -0.086 |
| jagn1a | 0.160 | mdka | -0.085 |
| stxbp1a | 0.160 | si:ch211-286b5.5 | -0.084 |
| hoxb8a | 0.160 | actb2 | -0.084 |
| sncgb | 0.159 | pcna | -0.083 |
| vamp2 | 0.154 | zfp36l1a | -0.083 |
| myt1a | 0.152 | pgrmc1 | -0.083 |
| cxxc4 | 0.152 | tpm3 | -0.082 |