Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc6a | 0.836 | atp5mc3b | -0.044 |
| LOC405768 | 0.698 | cox8a | -0.042 |
| si:dkey-238i5.2 | 0.692 | si:ch1073-429i10.3.1 | -0.038 |
| zgc:162612 | 0.567 | COX5B | -0.038 |
| ARHGAP6 | 0.517 | dynll1 | -0.034 |
| BX001023.1 | 0.497 | atp5pf | -0.034 |
| calcrlb | 0.487 | cox6a1 | -0.032 |
| foxc1a | 0.451 | cox7c | -0.030 |
| LOC101885478 | 0.445 | cox7a2a | -0.029 |
| wt1a | 0.422 | vdac2 | -0.029 |
| gdnfa | 0.412 | atp5pd | -0.029 |
| aspn | 0.411 | eif3ba | -0.028 |
| si:dkey-261m9.12 | 0.407 | epcam | -0.028 |
| olfml3a | 0.390 | cox5aa | -0.028 |
| cldn11a | 0.387 | psmb6 | -0.028 |
| rspo1 | 0.380 | rbm8a | -0.028 |
| si:dkey-12l12.1 | 0.380 | atp5f1d | -0.027 |
| cd248b | 0.379 | ndufa4l | -0.026 |
| hspa12b | 0.356 | elavl3 | -0.026 |
| fam198a | 0.354 | brk1 | -0.026 |
| ednraa | 0.349 | calm2a | -0.026 |
| ripor3 | 0.348 | zgc:193541 | -0.026 |
| BX088707.3 | 0.340 | tmsb | -0.026 |
| apcdd1l | 0.336 | oaz1b | -0.026 |
| ogna | 0.335 | atp5mf | -0.026 |
| si:ch73-233k15.2 | 0.331 | ywhabl | -0.025 |
| tcf21 | 0.331 | hmgb2b | -0.025 |
| hic1 | 0.328 | brd2a | -0.024 |
| ntd5 | 0.325 | alyref | -0.024 |
| prrx1b | 0.307 | si:rp71-45k5.4 | -0.024 |
| sept4 | 0.307 | selenof | -0.024 |
| si:ch1073-459j12.1 | 0.305 | psmb2 | -0.024 |
| acvrl1 | 0.301 | tmed7 | -0.024 |
| XLOC-018958 | 0.300 | ndufab1a | -0.023 |
| prickle1a | 0.293 | ywhaqb | -0.023 |