Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vill | 0.348 | elavl3 | -0.185 |
| si:cabz01007794.1 | 0.338 | stmn1b | -0.161 |
| trpm5 | 0.328 | tmsb | -0.157 |
| LOC100536671 | 0.327 | NC-002333.4 | -0.156 |
| atp2a3 | 0.321 | tspan2a | -0.144 |
| si:ch73-199e17.1 | 0.318 | si:dkey-276j7.1 | -0.143 |
| ponzr5 | 0.317 | rtn1a | -0.142 |
| foxq1a | 0.312 | tuba1a | -0.139 |
| adgrf3b | 0.312 | si:dkeyp-75h12.5 | -0.138 |
| CR318588.3 | 0.311 | zgc:65894 | -0.138 |
| rgs1 | 0.309 | adcyap1b | -0.138 |
| ccl19a.1 | 0.308 | pvalb5 | -0.136 |
| hopx | 0.308 | tmeff1b | -0.136 |
| gng13a | 0.307 | gng3 | -0.134 |
| gnb3a | 0.306 | sncb | -0.134 |
| ARF5 (1 of many) | 0.305 | insm1a | -0.134 |
| itpkb | 0.304 | vdac3 | -0.134 |
| itpr3 | 0.301 | si:ch211-153b23.5 | -0.134 |
| crip1 | 0.301 | ebf3a | -0.134 |
| klf3 | 0.296 | LOC100537342 | -0.131 |
| prox1a | 0.294 | atf5a | -0.128 |
| scinlb | 0.293 | hmgb1b | -0.128 |
| zgc:165423 | 0.293 | scg2b | -0.127 |
| tent5bb | 0.292 | nova2 | -0.124 |
| areg | 0.291 | fstl5 | -0.120 |
| si:dkey-248g15.3 | 0.291 | olfm1b | -0.117 |
| myl9a | 0.291 | bcl11ba | -0.117 |
| mvp | 0.291 | gnao1a | -0.116 |
| zgc:163121 | 0.290 | zc4h2 | -0.115 |
| avil | 0.289 | zgc:55461 | -0.115 |
| tbx2b | 0.289 | si:dkey-16p21.8 | -0.115 |
| ceacam1 | 0.289 | capslb | -0.114 |
| gstp2 | 0.288 | hsbp1a | -0.113 |
| rhoub | 0.287 | gnao1b | -0.112 |
| gng10 | 0.286 | si:ch211-222l21.1 | -0.112 |