Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| smim1 | 0.360 | rbm8a | -0.047 |
| psd2 | 0.314 | rpl29 | -0.038 |
| irx4a | 0.293 | thoc2 | -0.037 |
| si:ch211-210b2.3 | 0.256 | sec61b | -0.037 |
| or126-4 | 0.221 | actb2 | -0.035 |
| grin2bb | 0.180 | rbmx | -0.033 |
| crp6 | 0.173 | srsf11 | -0.033 |
| zgc:165603 | 0.168 | nasp | -0.033 |
| msi1 | 0.147 | fbl | -0.033 |
| crp7 | 0.143 | ppig | -0.033 |
| LOC101885586 | 0.139 | rps27.2 | -0.032 |
| entr1 | 0.136 | hnrnpd | -0.032 |
| gngt1 | 0.122 | nolc1 | -0.032 |
| XLOC-031121 | 0.122 | cd2bp2 | -0.032 |
| XLOC-037221 | 0.119 | naa10 | -0.031 |
| tlr4ba | 0.114 | mdc1 | -0.030 |
| mks1 | 0.114 | sumo3a | -0.030 |
| LOC101883642 | 0.111 | sf3b4 | -0.030 |
| LOC100149773 | 0.107 | eif1axb | -0.029 |
| alkal2a | 0.106 | ddx61 | -0.029 |
| adgrf8 | 0.103 | slbp | -0.029 |
| zgc:77752 | 0.103 | banf1 | -0.028 |
| CABZ01057364.1 | 0.102 | cdca7a | -0.028 |
| hoxd12a | 0.101 | gtf2f2a | -0.028 |
| lpar1 | 0.101 | si:ch73-308l14.2 | -0.027 |
| si:ch211-269e2.1 | 0.101 | ccnd1 | -0.027 |
| ftr53 | 0.097 | tia1 | -0.027 |
| XLOC-028682 | 0.095 | etf1b | -0.027 |
| LOC101883594 | 0.094 | xrn2 | -0.027 |
| CR352228.1 | 0.089 | mcm4 | -0.027 |
| XLOC-029278 | 0.085 | zgc:92818 | -0.026 |
| CCDC134 | 0.084 | sfpq | -0.026 |
| vcpkmt | 0.083 | p4hb | -0.026 |
| LO018128.1 | 0.083 | rwdd1 | -0.026 |
| mfsd9 | 0.083 | selenot1b | -0.026 |