Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cacna1fa | 0.710 | ybx1 | -0.076 |
| LOC110440098 | 0.505 | mt-co2 | -0.074 |
| eif4e1b | 0.467 | rpl7a | -0.070 |
| zmp:0000000619 | 0.385 | rps4x | -0.062 |
| pvalb7 | 0.310 | rpl34 | -0.056 |
| si:dkey-16j16.4 | 0.307 | mt-nd1 | -0.053 |
| si:ch211-161m3.6 | 0.307 | eef1b2 | -0.050 |
| mir29b-1 | 0.263 | h3f3c | -0.046 |
| b4galt5 | 0.252 | eif1b | -0.045 |
| kctd6a | 0.247 | cirbpb | -0.044 |
| XLOC-037556 | 0.230 | h2afvb | -0.043 |
| LOC108183900 | 0.227 | rps17 | -0.043 |
| slco5a1b | 0.214 | ppiaa | -0.041 |
| zgc:162962 | 0.197 | COX5B | -0.040 |
| tent5d | 0.184 | khdrbs1a | -0.040 |
| gpr37l1b | 0.183 | ddx5 | -0.040 |
| XLOC-016546 | 0.181 | eif3m | -0.039 |
| si:ch211-132g1.3 | 0.180 | mt-cyb | -0.039 |
| LOC101886822 | 0.178 | ubb | -0.038 |
| illr4 | 0.173 | rpl5a | -0.038 |
| trdmt1 | 0.171 | eif3ea | -0.036 |
| arhgef28 | 0.170 | ctsla | -0.035 |
| sec14l1 | 0.170 | ppib | -0.035 |
| atn1 | 0.170 | mt-nd4 | -0.034 |
| pkd1l2a | 0.169 | csnk1a1 | -0.033 |
| pld1a | 0.167 | si:ch1073-429i10.3.1 | -0.033 |
| XLOC-019592 | 0.163 | hnrnpa0l | -0.033 |
| shdb | 0.160 | ywhae1 | -0.033 |
| si:ch211-133l5.8 | 0.156 | myl12.1 | -0.032 |
| cwc15 | 0.152 | zgc:153867 | -0.032 |
| egln1b | 0.151 | ywhabl | -0.032 |
| vegfd | 0.147 | ssr4 | -0.032 |
| aven | 0.147 | tegt | -0.032 |
| smfn | 0.147 | pdia3 | -0.032 |
| RF00415 | 0.146 | fth1a | -0.031 |