Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col9a1a | 0.207 | fabp3 | -0.046 |
| col11a1b | 0.200 | si:ch211-137a8.4 | -0.044 |
| matn4 | 0.191 | apex1 | -0.042 |
| fibina | 0.185 | her15.1 | -0.041 |
| col9a3 | 0.175 | snrpf | -0.040 |
| cnmd | 0.172 | snrpd1 | -0.038 |
| col9a2 | 0.171 | XLOC-003689 | -0.037 |
| cthrc1a | 0.171 | ddx39ab | -0.036 |
| col5a1 | 0.170 | marcksb | -0.036 |
| col2a1b | 0.163 | snrpe | -0.036 |
| CU929237.1 | 0.162 | tuba1a | -0.036 |
| otos | 0.162 | nova2 | -0.034 |
| tgfbi | 0.162 | XLOC-003690 | -0.034 |
| olfml3b | 0.156 | XLOC-003692 | -0.034 |
| serpinf1 | 0.154 | cdkn2aipnl | -0.033 |
| mmp2 | 0.153 | hmgb3b | -0.033 |
| col2a1a | 0.150 | snrpb | -0.033 |
| foxc1b | 0.149 | cct4 | -0.032 |
| pmp22a | 0.149 | her12 | -0.032 |
| mfap2 | 0.149 | tuba1c | -0.032 |
| wfdc2 | 0.148 | her2 | -0.031 |
| cpxm1a | 0.147 | hes6 | -0.031 |
| LO018188.1 | 0.140 | ilf2 | -0.031 |
| pdgfrl | 0.140 | mcm7 | -0.031 |
| angptl1a | 0.138 | sox3 | -0.031 |
| dcn | 0.137 | aldoaa | -0.030 |
| ecrg4a | 0.136 | alyref | -0.030 |
| fgfbp2b | 0.136 | cbx3a | -0.030 |
| col12a1a | 0.135 | cct5 | -0.030 |
| cdh11 | 0.134 | dla | -0.030 |
| col11a2 | 0.134 | ptges3b | -0.030 |
| mmp14a | 0.132 | snrpd2 | -0.030 |
| crispld1b | 0.131 | stmn1a | -0.030 |
| sparc | 0.129 | abhd6a | -0.030 |
| si:ch1073-459j12.1 | 0.128 | cct3 | -0.029 |