| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox3 | 0.220 | zgc:65894 | -0.171 |
| six4b | 0.188 | tspan2a | -0.171 |
| notch3 | 0.184 | atp6v0cb | -0.167 |
| id3 | 0.183 | si:dkeyp-75h12.5 | -0.167 |
| her9 | 0.182 | rtn1a | -0.166 |
| her6 | 0.177 | stmn1b | -0.162 |
| XLOC-003690 | 0.175 | gng3 | -0.160 |
| XLOC-003689 | 0.175 | chga | -0.158 |
| id1 | 0.174 | pvalb5 | -0.150 |
| krt8 | 0.173 | rnasekb | -0.149 |
| krt18a.1 | 0.173 | adcyap1b | -0.146 |
| COX7A2 (1 of many) | 0.170 | sncb | -0.143 |
| angptl4 | 0.169 | atf5a | -0.139 |
| cldnb | 0.169 | scg2b | -0.138 |
| nid2a | 0.167 | map1b | -0.138 |
| eya1 | 0.166 | insm1a | -0.138 |
| ahnak | 0.165 | olfm1b | -0.137 |
| btg2 | 0.163 | si:dkey-276j7.1 | -0.136 |
| tagln2 | 0.162 | aplp1 | -0.135 |
| ccng1 | 0.160 | fstl5 | -0.133 |
| eef1a1l1 | 0.159 | vamp2 | -0.132 |
| BX901898.2 | 0.158 | gapdhs | -0.132 |
| sp8b | 0.158 | anxa13l | -0.132 |
| alp3 | 0.157 | gnao1b | -0.132 |
| cd9b | 0.157 | gsna | -0.131 |
| tspan7 | 0.156 | camk2n1a | -0.131 |
| rpl6 | 0.156 | atp2b1a | -0.131 |
| zgc:158343 | 0.155 | gnb1a | -0.131 |
| cnr2 | 0.154 | abhd2b | -0.130 |
| ppiaa | 0.153 | LOC100537342 | -0.129 |
| tuba8l | 0.152 | XLOC-024343 | -0.129 |
| zgc:56493 | 0.152 | syt1a | -0.128 |
| ier5 | 0.152 | fabp10b | -0.126 |
| aplnra | 0.151 | cnga4 | -0.126 |
| arhgef5 | 0.151 | si:ch211-153b23.5 | -0.126 |