Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-191j3.2 | 0.657 | h3f3d | -0.059 |
| hoxd13a | 0.516 | mt-cyb | -0.053 |
| hoxb10a | 0.435 | si:ch1073-429i10.3.1 | -0.048 |
| hamp | 0.425 | cox8a | -0.046 |
| CT573337.1 | 0.409 | calm3b | -0.042 |
| mxra5a | 0.404 | ywhabl | -0.042 |
| zgc:112334 | 0.403 | oaz1b | -0.039 |
| txnipb | 0.342 | slc25a3b | -0.039 |
| si:ch211-137i24.10 | 0.306 | mt-co2 | -0.036 |
| rab25b | 0.289 | hmgb2a | -0.036 |
| CR855311.1 | 0.288 | selenow1 | -0.036 |
| si:ch211-227e10.3 | 0.285 | cox7a2a | -0.036 |
| si:dkey-36i7.3 | 0.275 | atp5mc1 | -0.035 |
| cyp2aa4 | 0.243 | hmgn7 | -0.035 |
| acot20 | 0.232 | atp5l | -0.035 |
| RF00009 | 0.221 | ywhaqb | -0.034 |
| sytl2b | 0.207 | hmgn6 | -0.034 |
| ndufaf6 | 0.206 | eif1b | -0.034 |
| LOC108182329 | 0.202 | histh1l | -0.034 |
| pgm2l1 | 0.201 | cox4i1 | -0.034 |
| xkr8.3 | 0.198 | brk1 | -0.033 |
| CR450836.1 | 0.195 | atp5pd | -0.033 |
| fggy | 0.195 | marcksl1b | -0.033 |
| afap1l2 | 0.194 | atp5f1e | -0.033 |
| sh3d19 | 0.192 | cox6b2 | -0.033 |
| si:ch211-199m9.3 | 0.189 | hmgn2 | -0.033 |
| fbn2a.1 | 0.187 | COX5B | -0.033 |
| crhr2 | 0.187 | si:ch73-1a9.3 | -0.032 |
| tsen2 | 0.186 | cfl1 | -0.032 |
| def8 | 0.186 | cirbpa | -0.032 |
| LOC101886111 | 0.182 | h2afvb | -0.032 |
| adam28 | 0.181 | dynll1 | -0.032 |
| pfkfb3 | 0.173 | cycsb | -0.032 |
| csnk2a4 | 0.171 | khdrbs1a | -0.031 |
| ttc38 | 0.170 | atp5pf | -0.031 |