Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CR396583.1 | 0.074 | hmga1a | -0.031 |
| tbr1a | 0.073 | hmgb2a | -0.029 |
| CDHR1 (1 of many) | 0.069 | hmgb2b | -0.025 |
| LOC101885099 | 0.068 | pcna | -0.024 |
| zmp:0000001069 | 0.065 | rps4x | -0.024 |
| eomesa | 0.062 | rps19 | -0.024 |
| olfm1a | 0.051 | rpl32 | -0.023 |
| LOC103908978.1 | 0.050 | cx43.4 | -0.023 |
| tbr1b | 0.043 | id1 | -0.022 |
| slc17a6a | 0.042 | rplp1 | -0.022 |
| r3hdm1 | 0.041 | rplp2l | -0.022 |
| emx3 | 0.041 | eif5a2 | -0.021 |
| drd4-rs | 0.040 | hnrnpa1b | -0.021 |
| nrn1a | 0.039 | chaf1a | -0.021 |
| LOC103909443 | 0.039 | rpsa | -0.021 |
| cyp2k19 | 0.039 | ssrp1a | -0.021 |
| calm3a | 0.038 | anp32b | -0.020 |
| map1aa | 0.038 | si:dkey-151g10.6 | -0.020 |
| syt1a | 0.038 | stmn1a | -0.020 |
| si:dkeyp-4c4.2 | 0.038 | fen1 | -0.020 |
| necab1 | 0.038 | banf1 | -0.020 |
| CR751227.1 | 0.038 | mdka | -0.020 |
| olfm1b | 0.037 | ran | -0.020 |
| LOC101886347 | 0.037 | rrm1 | -0.020 |
| tmem163b | 0.036 | nop58 | -0.020 |
| sncb | 0.035 | mki67 | -0.020 |
| LOC108180211 | 0.035 | snrpb | -0.020 |
| si:ch211-66i15.5 | 0.035 | fbl | -0.019 |
| atp6v0cb | 0.035 | lbr | -0.019 |
| ywhag2 | 0.035 | rpl18a | -0.019 |
| BX323820.1 | 0.035 | nop56 | -0.019 |
| znf1163 | 0.035 | rpl13a | -0.019 |
| elavl4 | 0.035 | XLOC-003689 | -0.019 |
| BX908804.3 | 0.034 | her15.1 | -0.019 |
| ralyl | 0.034 | slbp | -0.019 |