Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ctsl.1 | 0.348 | hbae1.1 | -0.080 |
| ctss2.2 | 0.335 | hbbe1.3 | -0.077 |
| c1qb | 0.326 | hbae1.3 | -0.077 |
| si:dkey-5n18.1 | 0.309 | hbbe2 | -0.077 |
| cmklr1 | 0.303 | hbae3 | -0.076 |
| si:ch211-147m6.1 | 0.302 | fth1a | -0.073 |
| mpeg1.1 | 0.295 | cahz | -0.072 |
| c1qc | 0.291 | hbbe1.1 | -0.070 |
| lygl1 | 0.269 | zgc:56095 | -0.069 |
| marco | 0.266 | hbbe1.2 | -0.069 |
| si:ch211-194m7.3 | 0.265 | hemgn | -0.066 |
| lgals3bpb | 0.261 | si:ch211-250g4.3 | -0.064 |
| zgc:174904 | 0.257 | lmo2 | -0.063 |
| tnfb | 0.257 | alas2 | -0.063 |
| havcr1 | 0.256 | slc4a1a | -0.060 |
| mfap4 | 0.255 | nt5c2l1 | -0.058 |
| nfkbiaa | 0.253 | blvrb | -0.057 |
| cx32.2 | 0.251 | zgc:163057 | -0.056 |
| c1qa | 0.251 | epb41b | -0.056 |
| gm2a | 0.247 | creg1 | -0.055 |
| ms4a17a.10 | 0.246 | si:ch211-207c6.2 | -0.054 |
| ccl34a.4 | 0.244 | tspo | -0.053 |
| lgals2a | 0.241 | nmt1b | -0.052 |
| si:zfos-1069f5.1 | 0.238 | aqp1a.1 | -0.051 |
| si:ch211-1o7.3 | 0.236 | si:ch211-222l21.1 | -0.051 |
| slc3a2a | 0.233 | plac8l1 | -0.049 |
| grna | 0.231 | histh1l | -0.048 |
| tspan36 | 0.229 | arl4aa | -0.048 |
| BX897691.1 | 0.229 | tmod4 | -0.047 |
| CU499330.1 | 0.228 | znfl2a | -0.046 |
| stoml3b | 0.227 | anp32b | -0.046 |
| rnaset2l | 0.225 | hbae5 | -0.045 |
| ccl34b.1 | 0.223 | si:ch211-227m13.1 | -0.045 |
| paox1 | 0.222 | glrx5 | -0.045 |
| ctss2.1 | 0.221 | anp32a | -0.045 |