| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox2 | 0.102 | syt5b | -0.065 |
| zfp36l1a | 0.078 | otx5 | -0.064 |
| nat8l | 0.076 | crx | -0.063 |
| id1 | 0.075 | neurod1 | -0.056 |
| elavl3 | 0.074 | ckbb | -0.055 |
| pax6b | 0.072 | rs1a | -0.053 |
| XLOC-003690 | 0.071 | neurod4 | -0.053 |
| sox13 | 0.070 | pvalb1 | -0.050 |
| sox3 | 0.069 | ndrg1b | -0.050 |
| celf2 | 0.068 | sypb | -0.046 |
| si:ch211-222l21.1 | 0.065 | pvalb2 | -0.046 |
| fabp3 | 0.064 | snap25b | -0.046 |
| sox19a | 0.063 | vsx1 | -0.044 |
| ctnnb1 | 0.063 | gnb3a | -0.044 |
| notch3 | 0.063 | ppdpfa | -0.042 |
| si:dkey-56m19.5 | 0.061 | gapdhs | -0.042 |
| zfhx3 | 0.060 | actc1b | -0.041 |
| eef2b | 0.060 | atp2b1b | -0.041 |
| nkx2.9 | 0.060 | anp32e | -0.040 |
| lhx2b | 0.059 | nrn1lb | -0.039 |
| pax6a | 0.058 | samsn1a | -0.039 |
| her6 | 0.058 | ddah2 | -0.039 |
| eif5a2 | 0.058 | scg3 | -0.039 |
| ranbp1 | 0.058 | calb2b | -0.038 |
| marcksb | 0.058 | prdm1b | -0.038 |
| akap12b | 0.058 | ppp1r1b | -0.037 |
| hsp90ab1 | 0.057 | cplx4a | -0.037 |
| fzd5 | 0.057 | cnrip1b | -0.037 |
| mycn | 0.057 | prox1a | -0.037 |
| parp1 | 0.057 | pcp4l1 | -0.036 |
| rpl9 | 0.057 | stx3a | -0.036 |
| si:ch211-288g17.3 | 0.056 | rxrgb | -0.036 |
| her4.1 | 0.056 | atp6v0cb | -0.036 |
| tubb5 | 0.055 | tmx3a | -0.036 |
| nucks1a | 0.055 | rnasekb | -0.035 |