Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col5a1 | 0.112 | si:ch211-137a8.4 | -0.028 |
| col5a2a | 0.097 | nova2 | -0.026 |
| col1a2 | 0.089 | tuba1c | -0.026 |
| vwde | 0.088 | tuba1a | -0.025 |
| col11a1b | 0.084 | gpm6aa | -0.023 |
| col1a1b | 0.083 | fabp7a | -0.022 |
| emp2 | 0.083 | mdkb | -0.021 |
| mfap2 | 0.083 | rtn1a | -0.021 |
| tgfbi | 0.081 | ckbb | -0.020 |
| pmp22a | 0.080 | elavl3 | -0.020 |
| si:ch211-43f4.1 | 0.080 | cadm3 | -0.019 |
| meox1 | 0.079 | msi1 | -0.019 |
| postnb | 0.079 | si:dkey-276j7.1 | -0.019 |
| twist1a | 0.079 | sox3 | -0.019 |
| col1a1a | 0.078 | tmsb | -0.019 |
| colec12 | 0.077 | XLOC-003689 | -0.019 |
| col2a1b | 0.076 | XLOC-003690 | -0.019 |
| fkbp7 | 0.076 | her15.1 | -0.019 |
| cd248b | 0.075 | epb41a | -0.018 |
| dcn | 0.074 | mdh1aa | -0.018 |
| fkbp9 | 0.074 | rnasekb | -0.018 |
| si:ch1073-459j12.1 | 0.074 | stmn1b | -0.018 |
| fmoda | 0.073 | XLOC-003692 | -0.018 |
| pdgfra | 0.073 | her4.2 | -0.018 |
| fbn2b | 0.071 | nat8l | -0.017 |
| fstl1b | 0.071 | sox11b | -0.017 |
| cilp | 0.070 | abhd6a | -0.017 |
| cthrc1a | 0.070 | CU467822.1 | -0.016 |
| fkbp10b | 0.070 | myt1a | -0.016 |
| fap | 0.069 | myt1b | -0.016 |
| fkbp14 | 0.069 | pou3f1 | -0.016 |
| lrrc17 | 0.069 | tmed4 | -0.016 |
| reck | 0.068 | CU634008.1 | -0.016 |
| tnn | 0.068 | cldn5a | -0.015 |
| angptl7 | 0.067 | cspg5a | -0.015 |