Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nptxra | 0.485 | ssr4 | -0.046 |
| XLOC-020170 | 0.485 | rpl39 | -0.044 |
| CT997819.3 | 0.434 | hmga1a | -0.043 |
| abcc8b | 0.428 | si:dkey-151g10.6 | -0.042 |
| si:dkey-238o14.3 | 0.395 | rpl36 | -0.042 |
| igf1 | 0.359 | spaca4l | -0.042 |
| SDK2 (1 of many) | 0.327 | serbp1a | -0.040 |
| nxph4 | 0.321 | ssr3 | -0.040 |
| pcdh1g26 | 0.308 | rps13 | -0.039 |
| FAM163A | 0.294 | agr2 | -0.039 |
| FO704741.1 | 0.289 | pitpnaa | -0.037 |
| rx3 | 0.286 | si:dkey-42i9.4 | -0.036 |
| rtn4r | 0.281 | zgc:92380 | -0.036 |
| lnx2a | 0.263 | rab5c | -0.035 |
| LOC100001713 | 0.260 | meaf6 | -0.035 |
| LOC100333163 | 0.253 | snrpf | -0.035 |
| nr1d4a | 0.244 | kita | -0.034 |
| doc2b | 0.241 | rps29 | -0.034 |
| cacnb2b | 0.233 | hmgb2b | -0.034 |
| lrit1a | 0.233 | b3gnt7 | -0.034 |
| hrasls | 0.232 | rpl29 | -0.034 |
| gpr174 | 0.231 | wipf2a | -0.033 |
| BX323820.1 | 0.230 | nansb | -0.033 |
| si:ch73-40a17.4 | 0.227 | muc5.1 | -0.033 |
| neto1 | 0.224 | carhsp1 | -0.033 |
| mpp3b | 0.220 | calm1b | -0.033 |
| gabrr1 | 0.218 | rbm4.2 | -0.033 |
| si:ch1073-450f2.1 | 0.217 | nucks1a | -0.033 |
| cnrip1b | 0.217 | helz | -0.032 |
| cplx4a | 0.216 | si:ch211-39i22.1 | -0.032 |
| ntm | 0.212 | si:dkey-65b12.6 | -0.032 |
| CR925798.1 | 0.207 | her6 | -0.031 |
| slc12a5b | 0.206 | tmsb4x | -0.031 |
| FP326652.1 | 0.204 | hnrnpa1b | -0.031 |
| kcng2 | 0.204 | rps15a | -0.031 |