Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| stm | 0.280 | rpl37 | -0.141 |
| hspb1 | 0.265 | rps10 | -0.139 |
| nr6a1a | 0.245 | zgc:114188 | -0.117 |
| pou5f3 | 0.236 | rps17 | -0.104 |
| COX7A2 | 0.234 | prdx2 | -0.089 |
| cdx1a | 0.231 | hnrnpa0l | -0.077 |
| cx43.4 | 0.228 | zgc:56493 | -0.076 |
| zmp:0000000624 | 0.227 | h3f3a | -0.076 |
| alcamb | 0.225 | vdac2 | -0.075 |
| si:ch211-152c2.3 | 0.224 | zgc:158463 | -0.074 |
| tbx16 | 0.215 | mcl1a | -0.070 |
| bms1 | 0.211 | hbae1.1 | -0.070 |
| crabp2b | 0.208 | hbbe1.3 | -0.068 |
| sp5l | 0.207 | ap2m1a | -0.068 |
| cdx4 | 0.205 | hbae3 | -0.067 |
| zic2b | 0.205 | CR383676.1 | -0.066 |
| ppig | 0.204 | cct2 | -0.064 |
| si:dkey-66i24.9 | 0.203 | hbbe1.1 | -0.061 |
| hnrnpa1b | 0.200 | hbae1.3 | -0.061 |
| s100a1 | 0.200 | hbbe2 | -0.060 |
| polr3gla | 0.200 | ptmaa | -0.056 |
| hnrnpub | 0.196 | si:ch1073-429i10.3.1 | -0.056 |
| lig1 | 0.196 | romo1 | -0.055 |
| dnmt3bb.2 | 0.195 | gpx1a | -0.054 |
| LOC108190024 | 0.194 | hbbe1.2 | -0.053 |
| NC-002333.4 | 0.193 | cahz | -0.053 |
| BX927327.1 | 0.190 | pvalb1 | -0.051 |
| vox | 0.189 | blvrb | -0.051 |
| LOC103908832 | 0.188 | sod1 | -0.050 |
| ddx18 | 0.186 | arl6ip1 | -0.050 |
| anp32e | 0.186 | actc1b | -0.050 |
| safb | 0.186 | creg1 | -0.050 |
| ISCU | 0.185 | tspo | -0.049 |
| vrtn | 0.182 | atp5if1b | -0.049 |
| asb11 | 0.181 | pvalb2 | -0.049 |