Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou3f3a | 0.204 | hmgb2a | -0.020 |
| ferd3l | 0.168 | anp32e | -0.015 |
| si:ch73-30b17.2 | 0.152 | neurod4 | -0.014 |
| LOC103910031 | 0.151 | vsx1 | -0.012 |
| LOC101885266 | 0.121 | fabp7a | -0.012 |
| LOC101884748 | 0.113 | msi1 | -0.012 |
| pou3f3b | 0.110 | crx | -0.011 |
| si:ch1073-159d7.5.1 | 0.095 | otx5 | -0.011 |
| CU694808.1 | 0.089 | fkbp3 | -0.011 |
| gba3 | 0.085 | XLOC-042899 | -0.011 |
| nacc1b | 0.069 | rrs1 | -0.011 |
| inka1b | 0.064 | ccng1 | -0.011 |
| BX927329.2 | 0.057 | mki67 | -0.010 |
| LOC110438510 | 0.056 | psma8 | -0.010 |
| kitlgb | 0.054 | polr2eb | -0.010 |
| atp8b4 | 0.053 | utp3 | -0.010 |
| SP5 (1 of many) | 0.052 | si:dkey-108k21.10 | -0.010 |
| CABZ01012957.1 | 0.051 | smc2 | -0.010 |
| LOC110437917 | 0.050 | fzd5 | -0.010 |
| zp2l2 | 0.050 | zgc:110425 | -0.010 |
| BX005003.1 | 0.049 | mcm3 | -0.010 |
| trnR | 0.048 | bambia | -0.010 |
| vav3 | 0.047 | ahcy | -0.010 |
| zgc:195050 | 0.047 | zbtb18 | -0.010 |
| CABZ01060891.1 | 0.047 | pdap1a | -0.010 |
| BX323461.1 | 0.047 | sept4a | -0.010 |
| zswim6 | 0.046 | hes2.2 | -0.010 |
| RF00019 | 0.046 | ncapg | -0.010 |
| slc27a2a | 0.045 | nutf2l | -0.010 |
| lmo4b | 0.044 | rsl1d1 | -0.010 |
| LO018254.1 | 0.044 | foxn4 | -0.010 |
| BX470238.1 | 0.043 | prdm1b | -0.010 |
| mir181b-3 | 0.043 | mapk14a | -0.010 |
| pax10 | 0.042 | exosc2 | -0.010 |
| CABZ01037174.1 | 0.042 | fbxo5 | -0.010 |