Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| chrd | 0.112 | si:ch1073-429i10.3.1 | -0.031 |
| nr6a1a | 0.094 | ccni | -0.030 |
| si:ch211-152c2.3 | 0.094 | calm1a | -0.030 |
| pkdccb | 0.085 | hbbe1.3 | -0.029 |
| hspb1 | 0.084 | krt4 | -0.028 |
| admp | 0.082 | ckbb | -0.027 |
| tdgf1 | 0.078 | cyt1 | -0.027 |
| stm | 0.077 | gapdhs | -0.027 |
| alcamb | 0.075 | gpm6aa | -0.027 |
| shisa2a | 0.075 | hbae3 | -0.027 |
| zmp:0000000624 | 0.075 | pvalb1 | -0.027 |
| her3 | 0.072 | marcksl1a | -0.027 |
| nop2 | 0.072 | hbae1.1 | -0.026 |
| bms1 | 0.070 | pvalb2 | -0.026 |
| mybbp1a | 0.070 | rtn1a | -0.026 |
| cyp26a1 | 0.069 | stmn1b | -0.026 |
| sox19a | 0.069 | rnasekb | -0.025 |
| dkc1 | 0.068 | atp6v0cb | -0.024 |
| fbl | 0.068 | atp6v1e1b | -0.024 |
| nop58 | 0.068 | atp6v1g1 | -0.024 |
| npm1a | 0.068 | cyt1l | -0.024 |
| zic2b | 0.068 | gabarapa | -0.024 |
| dnmt3bb.2 | 0.067 | gng3 | -0.024 |
| gnl3 | 0.067 | gpm6ab | -0.024 |
| lig1 | 0.067 | actc1b | -0.023 |
| ncl | 0.066 | atp5if1b | -0.023 |
| ddx18 | 0.065 | eif4a1b | -0.023 |
| ebna1bp2 | 0.065 | gnb1a | -0.023 |
| nop56 | 0.065 | hbbe1.1 | -0.023 |
| sp5l | 0.065 | tob1b | -0.023 |
| gar1 | 0.064 | tuba1c | -0.023 |
| pes | 0.064 | vamp2 | -0.023 |
| hesx1 | 0.063 | wu:fb55g09 | -0.023 |
| pprc1 | 0.062 | gabarapb | -0.022 |
| rrp15 | 0.062 | gabarapl2 | -0.022 |