Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdh15 | 0.226 | stm | -0.107 |
| iqsec2b | 0.219 | agr2 | -0.106 |
| si:ch211-152l15.2 | 0.217 | col2a1a | -0.105 |
| LOC108180017 | 0.208 | col9a2 | -0.101 |
| LOC108181391 | 0.190 | otomp | -0.100 |
| gsnb | 0.189 | col11a1a | -0.093 |
| si:ch73-261i21.5 | 0.186 | si:dkey-98f17.3 | -0.092 |
| krt18b | 0.186 | bricd5 | -0.089 |
| si:ch211-229d2.5 | 0.184 | cldna | -0.088 |
| LOC101882067 | 0.182 | col9a1a | -0.088 |
| cldn8 | 0.181 | tbx2b | -0.087 |
| tmsb | 0.179 | sox10 | -0.087 |
| casq1b | 0.177 | col9a3 | -0.086 |
| spaca4l | 0.177 | efhd1 | -0.083 |
| phlda2 | 0.173 | FP017215.1 | -0.079 |
| sox21a | 0.173 | acbd7 | -0.078 |
| prss60.2 | 0.168 | col9a1b | -0.077 |
| tnks1bp1 | 0.167 | col2a1b | -0.076 |
| krt1-c5 | 0.164 | mdka | -0.074 |
| hoxb8a | 0.161 | atp1a1a.4 | -0.073 |
| krt15 | 0.161 | sparc | -0.073 |
| negaly6 | 0.160 | hmga2 | -0.073 |
| sdk1b | 0.159 | si:ch211-80h18.1 | -0.071 |
| gpa33a | 0.158 | matn4 | -0.071 |
| phtf2 | 0.156 | thbs1b | -0.070 |
| si:ch211-191i18.2 | 0.155 | AL954322.2 | -0.070 |
| CABZ01040999.1 | 0.154 | tbx2a | -0.070 |
| gbgt1l3 | 0.154 | col5a1 | -0.069 |
| arf3b | 0.154 | pax2a | -0.069 |
| rapsn | 0.152 | col15a1b | -0.067 |
| tmem176l.4 | 0.152 | pcdh7b | -0.067 |
| klf17 | 0.151 | cahz | -0.066 |
| si:ch211-103f14.3 | 0.150 | cdh11 | -0.066 |
| capn8 | 0.149 | col11a2 | -0.065 |
| cd109 | 0.148 | slc4a4b | -0.064 |