Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zgc:136930 | 0.249 | h3f3d | -0.143 |
| si:dkey-183i3.5 | 0.243 | hmgn2 | -0.134 |
| krtt1c19e | 0.227 | marcksl1a | -0.132 |
| rbp4 | 0.226 | h3f3a | -0.130 |
| col17a1a | 0.221 | hmgn6 | -0.129 |
| krt5 | 0.212 | khdrbs1a | -0.128 |
| CABZ01044281.1 | 0.209 | h2afvb | -0.128 |
| lgals1l1 | 0.207 | h2afva | -0.125 |
| col14a1b | 0.202 | hmgb2b | -0.124 |
| cxl34b.11 | 0.201 | snrpb | -0.122 |
| col1a2 | 0.197 | hmga1a | -0.120 |
| si:dkey-33c14.3 | 0.196 | snrpe | -0.119 |
| si:ch211-76l23.4 | 0.196 | lamb1a | -0.119 |
| col1a1b | 0.194 | cfl1 | -0.118 |
| krt91 | 0.193 | snrpd1 | -0.117 |
| wu:fa03e10 | 0.189 | krt18a.1 | -0.117 |
| col1a1a | 0.185 | cirbpa | -0.116 |
| sparc | 0.180 | NC-002333.4 | -0.114 |
| postnb | 0.175 | si:ch211-222l21.1 | -0.114 |
| col2a1b | 0.175 | syncrip | -0.114 |
| col11a1a | 0.175 | marcksl1b | -0.113 |
| aep1 | 0.174 | hmgb1b | -0.113 |
| ecrg4b | 0.172 | hnrnpaba | -0.113 |
| kera | 0.170 | ddx39ab | -0.112 |
| itgb1b.2 | 0.169 | hmgb3a | -0.111 |
| si:dkey-16p21.8 | 0.167 | srsf3b | -0.110 |
| zgc:77439 | 0.167 | nucks1a | -0.110 |
| CABZ01044277.1 | 0.166 | krt92 | -0.110 |
| zgc:175088 | 0.162 | snrpf | -0.110 |
| si:dkey-95h12.1 | 0.162 | apex1 | -0.109 |
| gapdhs | 0.158 | ptges3b | -0.109 |
| cdo1 | 0.158 | ilf2 | -0.109 |
| itgb4 | 0.158 | cd9b | -0.108 |
| cfd | 0.153 | snrpg | -0.108 |
| cotl1 | 0.153 | cirbpb | -0.107 |