Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| rh50 | 0.212 | id1 | -0.044 |
| s100a1 | 0.185 | XLOC-003690 | -0.041 |
| prdm14 | 0.164 | notch3 | -0.036 |
| il2rb | 0.163 | XLOC-003689 | -0.035 |
| inka1b | 0.151 | mdka | -0.034 |
| ptger4c | 0.150 | her15.1 | -0.034 |
| AL845419.1 | 0.134 | COX7A2 (1 of many) | -0.033 |
| tbx3b | 0.134 | sox3 | -0.033 |
| chodl | 0.126 | btg2 | -0.032 |
| si:ch211-171h4.3 | 0.126 | her4.2 | -0.032 |
| sema3e | 0.121 | marcksl1a | -0.031 |
| tinagl1 | 0.119 | gfap | -0.031 |
| ajap1 | 0.118 | si:ch73-281n10.2 | -0.031 |
| ackr3a | 0.112 | sdc4 | -0.030 |
| tecrl2a | 0.110 | XLOC-003692 | -0.030 |
| sema3c | 0.110 | cd82a | -0.030 |
| mnx1 | 0.107 | sparc | -0.030 |
| si:ch211-247j9.1 | 0.106 | her12 | -0.029 |
| LOC110439967 | 0.104 | sb:cb81 | -0.029 |
| valopa | 0.103 | nrarpb | -0.029 |
| pgfb | 0.102 | lfng | -0.029 |
| XLOC-002610 | 0.101 | her4.1 | -0.028 |
| slc18a3a | 0.099 | hmgn2 | -0.028 |
| LOC110439864 | 0.095 | sox19a | -0.027 |
| mpped2 | 0.095 | stmn1a | -0.027 |
| LOC101883647 | 0.095 | si:ch73-21g5.7 | -0.026 |
| SLC35D3 | 0.095 | zgc:165461 | -0.026 |
| sv2c | 0.095 | msi1 | -0.026 |
| XLOC-007300 | 0.094 | prdx2 | -0.026 |
| stmn3 | 0.091 | dut | -0.026 |
| opn8c | 0.088 | hmgb2b | -0.025 |
| gfra1b | 0.088 | hmgb2a | -0.025 |
| adrb2b | 0.088 | pgrmc1 | -0.025 |
| tac1 | 0.088 | gpm6bb | -0.025 |
| CR376762.1 | 0.086 | notch1b | -0.025 |