Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tuba1c | 0.031 | cfl1l | -0.016 |
| hmgb1b | 0.028 | tuba8l2 | -0.016 |
| nova2 | 0.028 | eef1da | -0.015 |
| tubb5 | 0.028 | epcam | -0.015 |
| si:ch211-137a8.4 | 0.027 | pfn1 | -0.015 |
| si:dkey-276j7.1 | 0.027 | ahnak | -0.014 |
| tuba1a | 0.027 | anxa1a | -0.014 |
| hmgb3a | 0.026 | cebpd | -0.014 |
| hnrnpa0a | 0.026 | cyt1 | -0.014 |
| nkain1 | 0.026 | krt5 | -0.014 |
| si:ch211-288g17.3 | 0.026 | mgst1.2 | -0.014 |
| tmeff1b | 0.026 | s100a10b | -0.014 |
| chd4a | 0.025 | tmsb1 | -0.014 |
| ckbb | 0.025 | wu:fb18f06 | -0.014 |
| vdac1 | 0.025 | zgc:175088 | -0.014 |
| smarce1 | 0.024 | aldob | -0.013 |
| elavl3 | 0.023 | capns1a | -0.013 |
| fabp3 | 0.023 | cast | -0.013 |
| gng2 | 0.023 | cd9b | -0.013 |
| gng3 | 0.023 | cebpb | -0.013 |
| idh2 | 0.023 | cyt1l | -0.013 |
| stmn1b | 0.023 | fbp1a | -0.013 |
| tmpob | 0.023 | icn | -0.013 |
| tox | 0.023 | krt4 | -0.013 |
| zc4h2 | 0.023 | pnp5a | -0.013 |
| cct2 | 0.023 | pycard | -0.013 |
| mbd3b | 0.023 | s100v2 | -0.013 |
| cct3 | 0.022 | si:ch211-105c13.3 | -0.013 |
| cd99l2 | 0.022 | si:ch211-166a6.5 | -0.013 |
| dnaja2b | 0.022 | si:ch211-195b11.3 | -0.013 |
| FO082781.1 | 0.022 | si:dkey-16p21.8 | -0.013 |
| hdac1 | 0.022 | zgc:153284 | -0.013 |
| hmgn3 | 0.022 | zgc:162730 | -0.013 |
| hp1bp3 | 0.022 | anxa1c | -0.012 |
| jpt1b | 0.022 | anxa2a | -0.012 |