Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.210 | si:ch1073-429i10.3.1 | -0.078 |
| polr3gla | 0.198 | calm1a | -0.076 |
| si:ch1073-80i24.3 | 0.192 | tuba1c | -0.072 |
| stm | 0.187 | ccni | -0.071 |
| asb11 | 0.181 | gapdhs | -0.070 |
| nnr | 0.174 | gpm6aa | -0.070 |
| s100a1 | 0.174 | rnasekb | -0.069 |
| si:ch211-152c2.3 | 0.174 | rtn1a | -0.068 |
| lrwd1 | 0.172 | atp6v0cb | -0.067 |
| si:dkey-66i24.9 | 0.170 | marcksl1a | -0.067 |
| add3b | 0.167 | hbbe1.3 | -0.066 |
| zgc:56699 | 0.167 | stmn1b | -0.064 |
| hspb1 | 0.160 | hbae3 | -0.063 |
| LOC108190024 | 0.160 | atp6v1e1b | -0.062 |
| tbx16 | 0.158 | atp6v1g1 | -0.062 |
| ved | 0.157 | gng3 | -0.061 |
| si:dkey-228b2.6 | 0.156 | gpm6ab | -0.060 |
| vrtn | 0.156 | pvalb1 | -0.060 |
| fbl | 0.155 | elavl3 | -0.059 |
| LOC100008030 | 0.155 | hbae1.1 | -0.059 |
| dkc1 | 0.153 | pvalb2 | -0.059 |
| si:dkeyp-114g9.1 | 0.153 | sncb | -0.059 |
| si:dkey-92i17.2 | 0.152 | ckbb | -0.058 |
| foxh1 | 0.149 | vamp2 | -0.058 |
| ing5b | 0.149 | wu:fb55g09 | -0.057 |
| nop58 | 0.149 | ywhag2 | -0.055 |
| si:ch211-173m16.2 | 0.148 | atpv0e2 | -0.054 |
| vox | 0.148 | gabarapl2 | -0.054 |
| bms1 | 0.146 | hbbe1.1 | -0.054 |
| npm1a | 0.146 | atp6ap2 | -0.053 |
| ddx18 | 0.145 | elavl4 | -0.053 |
| hnrnpa1b | 0.145 | fam168a | -0.053 |
| polr2gl | 0.145 | krt4 | -0.053 |
| pprc1 | 0.144 | nova2 | -0.053 |
| zic2b | 0.144 | si:dkeyp-75h12.5 | -0.053 |