Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgfbp2b | 0.069 | fabp3 | -0.022 |
| barx1 | 0.060 | her15.1 | -0.022 |
| CU929237.1 | 0.060 | si:ch211-137a8.4 | -0.021 |
| fibina | 0.059 | XLOC-003689 | -0.021 |
| foxc1b | 0.058 | XLOC-003690 | -0.021 |
| LO018188.1 | 0.058 | XLOC-003692 | -0.020 |
| pmp22a | 0.058 | tuba1a | -0.019 |
| rargb | 0.054 | nova2 | -0.018 |
| col9a1a | 0.053 | tuba1c | -0.018 |
| phlda3 | 0.050 | her4.2 | -0.018 |
| col12a1a | 0.048 | cldn5a | -0.017 |
| col2a1b | 0.048 | her12 | -0.017 |
| cspg4 | 0.048 | abhd6a | -0.017 |
| cald1b | 0.048 | dla | -0.016 |
| mfap2 | 0.048 | her4.1 | -0.016 |
| dlx4a | 0.047 | msi1 | -0.016 |
| six1a | 0.046 | fabp7a | -0.015 |
| col8a2 | 0.045 | her2 | -0.015 |
| lpar1 | 0.045 | hes6 | -0.015 |
| col5a1 | 0.045 | lfng | -0.015 |
| prrx1a | 0.044 | sox3 | -0.015 |
| rarga | 0.044 | aldoaa | -0.014 |
| sox9a | 0.044 | elavl3 | -0.014 |
| krt18a.1 | 0.043 | gfap | -0.014 |
| krt8 | 0.043 | gpm6aa | -0.014 |
| mmp2 | 0.043 | si:ch73-21g5.7 | -0.014 |
| twist2 | 0.043 | si:dkey-56m19.5 | -0.014 |
| col9a2 | 0.042 | apex1 | -0.013 |
| fstl1b | 0.042 | dlb | -0.013 |
| twist1a | 0.042 | her4.4 | -0.013 |
| prrx1b | 0.042 | LOC798783 | -0.013 |
| cdh11 | 0.041 | marcksb | -0.013 |
| col11a1b | 0.041 | notch1a | -0.013 |
| ecrg4a | 0.041 | notch1b | -0.013 |
| gsc | 0.041 | nrarpb | -0.013 |