Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC100329795 | 0.127 | snap25b | -0.034 |
| notch3 | 0.098 | atp6v1e1b | -0.033 |
| XLOC-020172 | 0.098 | syt5b | -0.032 |
| lfng | 0.093 | atp6v0cb | -0.032 |
| emilin1a | 0.091 | atp5if1b | -0.030 |
| her4.1 | 0.087 | atp6v1g1 | -0.030 |
| CABZ01067980.1 | 0.086 | sypb | -0.029 |
| si:ch211-172l8.4 | 0.085 | gapdhs | -0.029 |
| si:ch211-191j22.8 | 0.084 | rnasekb | -0.029 |
| CR848047.1 | 0.084 | otx5 | -0.027 |
| CU467822.1 | 0.081 | rs1a | -0.027 |
| LOC101886429 | 0.081 | crx | -0.025 |
| her12 | 0.081 | atpv0e2 | -0.025 |
| CU634008.1 | 0.080 | atp1b2a | -0.025 |
| si:ch73-215f7.1 | 0.078 | tob1b | -0.024 |
| notch1b | 0.078 | atp6ap2 | -0.024 |
| cald1a | 0.077 | vamp2 | -0.023 |
| her4.2 | 0.074 | sh3gl2a | -0.023 |
| si:ch73-21g5.7 | 0.072 | ndrg4 | -0.023 |
| CR450824.2 | 0.072 | gng13b | -0.023 |
| XLOC-003690 | 0.071 | calb2b | -0.023 |
| sox9b | 0.069 | atp6v1h | -0.023 |
| LOC798783 | 0.069 | atp1a3a | -0.023 |
| AL845365.1 | 0.068 | calm1a | -0.022 |
| FP885542.1 | 0.068 | atp2b1b | -0.022 |
| her15.1 | 0.068 | tpi1b | -0.022 |
| fzd5 | 0.068 | sncb | -0.021 |
| cldn5b | 0.067 | olfm1b | -0.021 |
| XLOC-003692 | 0.066 | oaz1b | -0.021 |
| abhd6a | 0.066 | pcp4l1 | -0.021 |
| gpr37a | 0.065 | gng3 | -0.021 |
| pou3f1 | 0.064 | zc4h2 | -0.021 |
| si:dkeyp-106c3.2 | 0.063 | gabarapl2 | -0.021 |
| mdka | 0.063 | elmo1 | -0.021 |
| akap12b | 0.061 | cplx4a | -0.021 |