Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her12 | 0.138 | gapdhs | -0.060 |
| notch3 | 0.135 | atp6v0cb | -0.058 |
| her4.1 | 0.134 | snap25b | -0.058 |
| CU467822.1 | 0.130 | syt5b | -0.053 |
| si:ch73-215f7.1 | 0.127 | sypb | -0.051 |
| si:ch73-21g5.7 | 0.125 | rnasekb | -0.051 |
| XLOC-003690 | 0.124 | atp6v1g1 | -0.051 |
| LOC798783 | 0.122 | atp6v1e1b | -0.050 |
| her4.2 | 0.122 | ppdpfb | -0.048 |
| XLOC-003692 | 0.119 | atpv0e2 | -0.047 |
| her15.1 | 0.117 | ckbb | -0.046 |
| pou3f1 | 0.114 | xbp1 | -0.045 |
| CU634008.1 | 0.113 | calm1a | -0.045 |
| lfng | 0.112 | rs1a | -0.045 |
| notch1b | 0.109 | crx | -0.044 |
| sox9b | 0.109 | otx5 | -0.044 |
| abhd6a | 0.109 | vamp2 | -0.044 |
| fzd5 | 0.108 | atp6ap2 | -0.042 |
| LOC101886429 | 0.107 | tpi1b | -0.041 |
| ncalda | 0.105 | atp1b2a | -0.041 |
| XLOC-003689 | 0.105 | atp1a3a | -0.041 |
| hes2.2 | 0.102 | oaz1b | -0.041 |
| dla | 0.100 | calb2b | -0.040 |
| zgc:165555.3 | 0.100 | ndrg4 | -0.039 |
| CR848047.1 | 0.098 | tob1b | -0.038 |
| her4.4 | 0.096 | olfm1b | -0.038 |
| hist1h4l | 0.095 | ppp1r14c | -0.038 |
| sox18 | 0.094 | sncb | -0.037 |
| BX664610.1 | 0.093 | atp5if1b | -0.037 |
| si:dkey-261m9.17 | 0.092 | atp2b1b | -0.037 |
| ccnd1 | 0.091 | oaz1a | -0.037 |
| si:dkey-238o13.4 | 0.090 | sh3gl2a | -0.037 |
| ascl1a | 0.090 | gng13b | -0.037 |
| cldn5b | 0.089 | cnrip1b | -0.036 |
| cald1a | 0.089 | zfhx4 | -0.035 |