see annotation note
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fam161b | 0.369 | rps12 | -0.060 |
| usp20 | 0.361 | rpl18 | -0.050 |
| vps13d | 0.346 | ybx1 | -0.048 |
| XLOC-019960 | 0.343 | tpt1 | -0.046 |
| zgc:174938 | 0.284 | rpl18a | -0.046 |
| zgc:92749 | 0.278 | rpl15 | -0.045 |
| XLOC-006515 | 0.266 | mt-co2 | -0.044 |
| cyp2p10 | 0.246 | rack1 | -0.043 |
| fgfr1b | 0.222 | rps25 | -0.042 |
| arhgef37 | 0.204 | hsp90ab1 | -0.041 |
| gpsm2 | 0.193 | rps3a | -0.039 |
| coasy | 0.186 | rpl19 | -0.038 |
| znf143b | 0.172 | rps6 | -0.037 |
| si:dkey-22l11.6 | 0.172 | rps26 | -0.035 |
| mnat1 | 0.172 | COX3 | -0.033 |
| fndc3a | 0.168 | rpl3 | -0.033 |
| ralgps2 | 0.164 | h3f3d | -0.032 |
| cldn17 | 0.163 | rpl5b | -0.031 |
| cul4a | 0.163 | serbp1a | -0.030 |
| slc30a1a | 0.160 | mt-cyb | -0.029 |
| gna15.3 | 0.159 | ppiaa | -0.029 |
| qrich1 | 0.147 | uba52 | -0.029 |
| adra2b | 0.140 | xbp1 | -0.029 |
| cpz | 0.140 | rpl9 | -0.028 |
| sp4 | 0.138 | rpl5a | -0.027 |
| wdr26b | 0.135 | ran | -0.025 |
| dnajc25 | 0.135 | eef1g | -0.024 |
| cntn1a | 0.134 | cirbpa | -0.024 |
| LOC101885801 | 0.131 | snrpf | -0.023 |
| neo1a | 0.125 | edf1 | -0.023 |
| alcama | 0.121 | ubc | -0.023 |
| setdb1a | 0.121 | pnrc2 | -0.023 |
| shroom4 | 0.120 | btf3 | -0.023 |
| utrn | 0.119 | serf2 | -0.023 |
| ctdsplb | 0.117 | nme2b.1 | -0.022 |